| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0053 |
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| Symbol | |
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| ID | 6275114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 73252 |
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| End bp | 74193 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642612096 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001876680 |
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| Protein GI | 187734568 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0166309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.103773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAACA TGCTCCGGCG CATTTTGATT CCTTTTCTGT GTCTTCTGGG CCTGTTCTGC
TCTCTTCAGG CCCAGGATGC CCCAGTATTG AAAATCGCGG TTCTGCACCC CGTCTTGGGA
GACATGGCCC GCGCCATCGG CGGCAGCCGC GTGCAGGTGG CGGACCTGCT GCGCCCCAAC
GGCAACCTGC ACAGCTTTGA ACCCTCGCCG CAGGACATTG CCGCCGCAGG ACGGGCGCGC
CTGGTGCTGG CCTCCGGCAA AAACCTGGAG CCGTACCTTC CCAAATTAAA GGACGCCCTG
GGAGGCAGCG CGCAAATTCT GGATCTCGGA GCCTCCGTCC CGGATGTTCC CGTGGAGGAA
GACACCGCAG ACCATGACCA CGAACACGAC GGAGACTGCT GCGCCCACGG TCCCAACGAT
CCCCACTGGT GGCACACACC GGCCAATATG AAACGCGCCG CCCGCACCCT GGCCGCAACG
CTCACGCGGC TGGACCCGGA CCATGAACAG GACTATAAAG TCGGCTTGTC CCGGTGGAAC
AGAAAGATGG ACCAGCTTTC CTCCTGGGCC AGAAAGGAAC TTGCGGACAT TCCGGAAACG
GACCGCGTCC TGGTTACGGG GCATGCGGCC ATGAACCATT TCTGCAGGGA ATTCGGCTTC
CGCAGCATCA GCATCCAGGG GATAAGCCGT GAAGATGAAG GCAACTCCGC CCAGCTGGCC
TCCACGCTGA AAAAGCTGAG GTCAGCCGGG GTAAAAGCCC TGTTCCCGGA ATATTCCTCC
AACCCCAAGA GCCTTACGGA AATCGCCAAA TCCCTGAACA TCCCCGTTGC CAGACCAATC
AATACCGACG GGCTGGCCCC TGAGGGCCAC ACGTTCGAAT CCATGTTCAG ACAAAACACA
GGCATCATCA AGGAAGCCCT TTCCCCGTCT CCCAGGCCAT GA
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| Protein sequence | MRNMLRRILI PFLCLLGLFC SLQAQDAPVL KIAVLHPVLG DMARAIGGSR VQVADLLRPN
GNLHSFEPSP QDIAAAGRAR LVLASGKNLE PYLPKLKDAL GGSAQILDLG ASVPDVPVEE
DTADHDHEHD GDCCAHGPND PHWWHTPANM KRAARTLAAT LTRLDPDHEQ DYKVGLSRWN
RKMDQLSSWA RKELADIPET DRVLVTGHAA MNHFCREFGF RSISIQGISR EDEGNSAQLA
STLKKLRSAG VKALFPEYSS NPKSLTEIAK SLNIPVARPI NTDGLAPEGH TFESMFRQNT
GIIKEALSPS PRP
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