| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0051 |
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| Symbol | |
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| ID | 6275121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 68018 |
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| End bp | 69757 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612094 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001876678 |
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| Protein GI | 187734566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.458674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.205446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG GTTTTCATTG GACTCTACGC CCTTCCGTGA AGGAGGATGA TCCGGTCTTG
AAAGCGTTTC CTGCGGAACT GCCCCTGCTG GTCAAGCAGC TCCTGCTGCA GCGCGGCTTC
ACCGGGGGAA TGGAAACGGA ACTCTTTCTG GACCCCAGGC TCTCCCACCT GAGCGACCCT
TTCCTGATGG GGGAAATGAG GGCTGCCGTG GACCGCATTT TCCGGGCCGT GGATGAAGGG
GAAACCGTGT GCATTTATGG GGACTATGAT GTGGACGGTG TCACCTCCGT GGCGCTTCTC
CGGGCCATTT TGATGGCTTA TGACCTGGAT CCCCAGTATT TTATTCCCGT CCGTTCCCGG
GAAGGCTACG GACTCAGCGA GGCCGGCATC AAGCGTTGCC TTTGCGAATG TGCGGACCCT
CCCAGCCTGC TTATTACGGT GGACTGCGGC ACTTCCTCCG TGAAGGAGGT GGACATGCTT
AACAGTCTGG GGATAGACGT AATCATTCTG GATCACCATG AGGCGGGCCC TTTGGGGCGT
CCGGATGCAG CGGCGGTGGT CAATGCCAAA ATTGAGGAAA ACAGCCCATA TACTTATCTG
TGCAGCGCGG GCGTAGTCTT CAAGCTGGCG CATGCCCTCC TGAAGGAGCG GAAACTGAAA
ACCTTTGACC TGAAACTTTA TCTGGACCTG GTGGCCGTGG CAACCGTGGC GGACATTGTT
CCCCTGGTGG CGGAAAACAG GATTCTGGTT CGCCACGGCC TGGGCAGGCT GGCGCACAGC
CGCCATACGG GCCTCAAAAC CCTGACGGAA ATAGCGGGCA TCCGACCTTC CGACTCCGTC
AACCACGCGG GCTTCCTGAA CGCCGCCCAC GTGGGGTTCA GGATAGGCCC GCGCATTAAT
GCCGCCGGGC GCATGGATTC CCCCATGGAT GCGTTGGAAC TCCTGCTGAC CATGGATGCC
AGGAGGGCCG TGCAGCTTGC CCAAATGCTG GATTCCCACA ACCGCAAGCG GCAGGAGGAA
GAGGAGGCCA TCCGGACGGA TGCGGTGGAA ATGCTTCATA ACTCCTTTGA CCCGGAGAGG
GATAACGTCA TTGTGCTGGG TTCCCGCGCG TGGCATCCCG GCGTGGTGGG CATTGTAGCC
TCCCAGCTGA TGAGGCGGTA CCACAAGCCG ACCTTCGTCA TCGCCTTTGA CGAAAGCGGC
GTGGGGAAGG GCTCCGGCCG TTCCATTCCC GGCGTGTCCC TGGTGCAGGC CATTCACCAT
TGTGCGGATA CGCTGGTTTC CGGCGGCGGC CATGACATGG CGGCGGGGCT GGTGATTGAA
GAATCCCGCA TGGACGATTT CCGCCGGGCA TTCAACCGTT ATGTGTCTGA AACCACGACG
GAGGAACAGC GCAGCCCCGT GCTCAACATA GACATGGAAG TGTCCTTCCA GGCGTTGACG
CTGGATTTGC TGGACAGCTA TGAAAAGCTG GAACCTTTCG GCAACTCCAA TCCACAGCCT
CTCTTCATGA GTTCCGACGT TTTTCCCACG GAACCGCCCA AGCGCGTGGG AACCAATCAT
CTGAAGCTTT TCATGCGCCA GGGCATCGTG GAGCGTGACG CTATTTTCTT CAACGGAGCG
GAACGGGAGC TTCCCAATCC TCCCTGGGAT ATCGCTTTCA CGATTGACCG CAACGTGTAC
CGCGGCCGCG CCTCCCTGTC CATTTCCATT CAGGAAATAC GTTCCCACCG GGAAATGTAG
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| Protein sequence | MTPGFHWTLR PSVKEDDPVL KAFPAELPLL VKQLLLQRGF TGGMETELFL DPRLSHLSDP
FLMGEMRAAV DRIFRAVDEG ETVCIYGDYD VDGVTSVALL RAILMAYDLD PQYFIPVRSR
EGYGLSEAGI KRCLCECADP PSLLITVDCG TSSVKEVDML NSLGIDVIIL DHHEAGPLGR
PDAAAVVNAK IEENSPYTYL CSAGVVFKLA HALLKERKLK TFDLKLYLDL VAVATVADIV
PLVAENRILV RHGLGRLAHS RHTGLKTLTE IAGIRPSDSV NHAGFLNAAH VGFRIGPRIN
AAGRMDSPMD ALELLLTMDA RRAVQLAQML DSHNRKRQEE EEAIRTDAVE MLHNSFDPER
DNVIVLGSRA WHPGVVGIVA SQLMRRYHKP TFVIAFDESG VGKGSGRSIP GVSLVQAIHH
CADTLVSGGG HDMAAGLVIE ESRMDDFRRA FNRYVSETTT EEQRSPVLNI DMEVSFQALT
LDLLDSYEKL EPFGNSNPQP LFMSSDVFPT EPPKRVGTNH LKLFMRQGIV ERDAIFFNGA
ERELPNPPWD IAFTIDRNVY RGRASLSISI QEIRSHREM
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