| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0048 |
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| Symbol | |
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| ID | 6275137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 64665 |
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| End bp | 66170 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612091 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001876676 |
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| Protein GI | 187734564 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.331446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG GGGACGCAAG AGAAGGCATC ATACGCGGCA AGGCGGCACG CGCCCGCCTG
GGCGGAAAAC TTGCCGGACT ATCCCTGCCC CGGCAAATCG CCGTGATTGC TTTCTGGCCA
TTCCTGGAAC AGCTGCTGAG CTTTTTCGTC ACCTCGTCCG ACCTTTTCAT CGCCACTAAA
ATAGGGGTGG ACGCCCAGGA CACCATCAAC ATCTCTGACG GCATGGGCGC CGTCGTCTTC
ATCATGTGGT TCGGCTTCGT CATCCAGGGG TCTATCATGA TGGGAGCCAC AGCCATCGTT
TCCCGCATGA CGGGCGCCAG GGACTATCCC CAGGCCCAGC ATGGCCTGCA CCAGGCCGCC
ATGCTGGGGC TCCTGGCAGG AACCATCTCC TGCGGACTTC TCTTCACATG CAGCGATTTC
CTGGTCACGC ACGTACTGAC CATGAATGAA ACCGCCCGGG CCTACGCCCT GCAATACGTT
TATATGGCCG CATTTGCGGC CCCGTTCAGC GGCGTGGTCT TTGCCATCAA TGCCGCCCTG
CGAGGCTCCG GAGACACGCG GCTTCCCTTC TGGATCATGA TGAGCGTAGG CATCCTCAAT
GTCATCTTCA GCGTCATCTT CGTCTTTGCG GACGCTCCTC TGGGCGGCTG GCGCATCGGA
GGAATTGCGG CAGGAACGGT CTGCGGCTAC GGCATCAGCA TGTGCATCCT GCTGTTCATC
ATGCTGCGGC GCAGAAAAAA AATCTTCACG GGCAGGAAAA ATGAATCCCT GGAAGAACTT
GTCCGGGAAC GGGGAGAACA CTATGCCCCG CCCCTGTACC TCAGCTTTTC CCATCTGCGG
CCGGACATGG GCATGCAGAA GCGCATCCTG AAAATCGGGC TGCCGCAGGC CGTGGAAGTC
TTCGGCATGT GGGGCATCCA GATGTTCTGC CTTTCCATCA TCAGTGAACT GCCTGTTAAA
GGCGTGCTGG GCGTCCACAA TATTGCCGTC CGCATTGAAT CGCTCAGTTT CCTGCCCGGC
TTCGCCATCG GCATGGCCGC TTCCACGCTC GTGGGGCAAT ACCTGGGCGC CCGGAACGCG
CTTATGGCCC GCATCACCAT CTGGAAATGC ATGCGGTACG CCGTCATCTT CATGACAGGC
CTGGGAGTGC TCTTCAGCGC CTTTCCCGCC CTGTTCATGG AGATATTTTC CAACGGCAGC
ACGACCCTCA TTGATACCGG AATCCCCGTG TTGCGCACCA TGTTGGTGGT GGAACCCTTC
TTCGCCGCCT GCATCGTGAT GAAAATGTCC CTGCGCGGCG CGGGAGACAC CCGGAGAGTC
ATGCTTATTT CCTACGGCAT TATGGGCTTT TTCCGGGTCG TCTGCACCTG GGTATGGTTC
AGGCTGGCAC CGGAAACCAT GACTTTGTGG GGCATCTGGC TGGTTTTCGC CTTTGAAATG
GCCGTTCAAT CCGCCATCCT CTATAAAATC GTCAAGGGGC GGAGCTGGAC GAAGCTGCAA
GTCTGA
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| Protein sequence | MSAGDAREGI IRGKAARARL GGKLAGLSLP RQIAVIAFWP FLEQLLSFFV TSSDLFIATK
IGVDAQDTIN ISDGMGAVVF IMWFGFVIQG SIMMGATAIV SRMTGARDYP QAQHGLHQAA
MLGLLAGTIS CGLLFTCSDF LVTHVLTMNE TARAYALQYV YMAAFAAPFS GVVFAINAAL
RGSGDTRLPF WIMMSVGILN VIFSVIFVFA DAPLGGWRIG GIAAGTVCGY GISMCILLFI
MLRRRKKIFT GRKNESLEEL VRERGEHYAP PLYLSFSHLR PDMGMQKRIL KIGLPQAVEV
FGMWGIQMFC LSIISELPVK GVLGVHNIAV RIESLSFLPG FAIGMAASTL VGQYLGARNA
LMARITIWKC MRYAVIFMTG LGVLFSAFPA LFMEIFSNGS TTLIDTGIPV LRTMLVVEPF
FAACIVMKMS LRGAGDTRRV MLISYGIMGF FRVVCTWVWF RLAPETMTLW GIWLVFAFEM
AVQSAILYKI VKGRSWTKLQ V
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