| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0040 |
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| Symbol | |
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| ID | 6275160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 55485 |
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| End bp | 56894 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612081 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001876668 |
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| Protein GI | 187734556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.489781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG CCCTCCAAAA TGCCTTTTTC CAGACCGGGG ACACGCTCAC ATCCTGGCTG
TCCGCTTTCA GCAGCTTCCT GTGGGGATGG CCCCTGCTCA TCATGCTGCT GGGCACGCAC
CTGTACCTCA CCGCCATCCT GCGGTTTCCG CAGCGTTATC TGCTTAAGGC CCTGAAATTG
TATTTTGTGA AAGATCATAC GGACAAGGGA GATATCTCCC CGTTCAGCTC CCTGATGGTG
GCCCTGGCAG CCAACATCGG CGCCGGGAAT ATCATCGGCG TGGGCGTGGC GATTGCAGCC
GGAGGCCCCG GCGCCGTCTT TTGGTGCTGG CTGACGGGAG TTCTGGGAAT GGCAACCCGT
TATTCGGAAG GATTGCTCGC CATCAAATAC CGGGTGGAAA ACAAGGACGG CAATATGAGC
GGAGGCCCCA TGTTCGTGCT GGAACGCGGT CTGAACAGCA AATGGCTGGG GGCAGCCTTC
GCCGTCTTCA CGGCCATTGC CGCCTTCGGG ATCGGCAATC TGACGCAAGG GAACGCAGCG
GCGGAACAGC TCCACCACGC CTTTTCCATT CCCTCCTGGG GAACAGCCGC CGTTCTGACG
GCATTGACGG CTCTGGTGAT GCTGGGAGGC ATCCAGGGCA TTGCCAGGGT ATGCGCTTTC
TTCGTGCCGT TCATGGCCGT CATCTATATC ATGGGATGCC TGTATATCCT GACCGTACAG
GCAGAGTATA TTATTCCCGC CATCCGGTAT ATTCTGGACT GCGCCTTCAC GGGAGAAGCC
GCCGCCGGGG GCGCAGCAGG AGCGGCCGTC ATGGCGGCAA TGAGAACCGG TGTGGCCCGG
GGCCTCTTTT CCAATGAGGC CGGCCTGGGA TCCGCAGCCA TCGCCTCCGC CGCAGCGCAG
AACCGCAACC CCGTCAGGCA GGCGCTCATC TCTTCCAGCG GCCCCTTCTG GGATACCGTC
ATTATCTGCG CCCTGACGGG AATTGTGCTG ACCACCAGCA TCATCGCGCA TCCGGACATT
TCCTGCACGG ACGGCCCCAG GCTTACTACG CTGGCATTCA GCAAAATTCC TTACATAGGC
TCCCCTCTGC TCACGCTCAG CCTGGTTACG TTTGTAGTTT CCACCATTCT GGGCTGGTCC
TACTTCGGAG AAAAAGCGCT GGAATACCTG GGAGGCATCC GGCTGATCAT GCCTTACCGC
GTCATCTGGG TGGCGGCGGT CTTCATCGGC TGCGTCTCTA AAATAGAACT GGTATGGATT
TTTGCAGACT GCGCCAACGG CCTGATGGCC CTGCCCAACC TCATTTCCCT GCTGGCACTT
TCCGGCGTGC TTGTCCAGCA AACGCGGTAC TACCTCTGGC AGCACAGGCT GGACGATTAC
GACGAATCCC ACATACCGGA AGGAAAATAA
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| Protein sequence | MLDALQNAFF QTGDTLTSWL SAFSSFLWGW PLLIMLLGTH LYLTAILRFP QRYLLKALKL
YFVKDHTDKG DISPFSSLMV ALAANIGAGN IIGVGVAIAA GGPGAVFWCW LTGVLGMATR
YSEGLLAIKY RVENKDGNMS GGPMFVLERG LNSKWLGAAF AVFTAIAAFG IGNLTQGNAA
AEQLHHAFSI PSWGTAAVLT ALTALVMLGG IQGIARVCAF FVPFMAVIYI MGCLYILTVQ
AEYIIPAIRY ILDCAFTGEA AAGGAAGAAV MAAMRTGVAR GLFSNEAGLG SAAIASAAAQ
NRNPVRQALI SSSGPFWDTV IICALTGIVL TTSIIAHPDI SCTDGPRLTT LAFSKIPYIG
SPLLTLSLVT FVVSTILGWS YFGEKALEYL GGIRLIMPYR VIWVAAVFIG CVSKIELVWI
FADCANGLMA LPNLISLLAL SGVLVQQTRY YLWQHRLDDY DESHIPEGK
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