Gene Amuc_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0039 
Symbol 
ID6275161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp54611 
End bp55021 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content50% 
IMG OID642612080 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001876667 
Protein GI187734555 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.42411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT TTACGGAAGA GAAGAAATTT TCCAGGGAAG ATGTTCAAGA ATTGTTCCTG 
TCCGTTGGCT GGATTTCCGG ACAATATCCG GGGCGTCTGT TCAAGGCTCT CATGAATTCG
TCCACTGTTG TTACGGCTTG GGACGGTGAC CGCCTGGCAG GGCTGGTGCG GGTGCTGGAC
GACAGCGAGA TGGTTGCCTA CATGCATTAT GTTCTGGTGC ATCCCGCTTA TCAGGGCAGG
GGGATTGCTG GAAAAATGGT GGAAATGGTT AAGGAAAAAT ACAGGGACTA CCTGTATCTT
GAAATCATGC CGGAGGAGAG CAGAAACGCC GCTTTTTATG AGAAGCACGG CTTCCGGGTT
ATGGAAGACG GCGTAGCCAT GCAGCTGTGC AACTTTTCAA ACAGGAGCTG A
 
Protein sequence
MIVFTEEKKF SREDVQELFL SVGWISGQYP GRLFKALMNS STVVTAWDGD RLAGLVRVLD 
DSEMVAYMHY VLVHPAYQGR GIAGKMVEMV KEKYRDYLYL EIMPEESRNA AFYEKHGFRV
MEDGVAMQLC NFSNRS