Gene Amuc_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0030 
Symbol 
ID6275189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp38259 
End bp39353 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content57% 
IMG OID642612070 
Producthypothetical protein 
Protein accessionYP_001876658 
Protein GI187734546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.549525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC TCAAGGCTGT ATCAACCCTG TTCGATCTCC GCGGCGATTT TGTCCACGGT 
TATTCCTACG GCAGCGGCCA CATCAATGAC ACCTACTGTA TCTGGGTGGA TCAGGCGGGA
CAGCGCATCC GCTACATCCT CCAGCGCGTG AACCATAACG TGTTCAAGCA GCCCATCCCT
CTGATGGAGA ACGTAAAGCG CGTGACGGAC CACGCCCTGA AGCGCCTGAA GGAGGAACAG
TGCCCGGAAG CTTACCGCCG CACTCTCACG CTGGTTCCCT CCGTGGACGG CAAGCCGTAC
GCCCTGGATT CGGACGGCAA CTGCTGGCGC GTGTACCCGT TCATTGAACG CGCACGCACG
TATGACCAGA TTGAAACTAC CAGGCAGTGC CAGGAAGCGG CGCGCGCCTT CGGCGAATTC
CAGAAGCTCA CGGCAGACCT GCCCGGAGAG CCCCTGTTTG AAACCATTCC CAATTTCCAC
AATACCACTT CCCGCCTGGC GGCTCTGAAA GAGGCCATCC AGTCCGACCC CCTGGGGCGC
GTGAAGGAAG TGCAGAAGGA AATAGACTGG TACCTTTCCC GTGAGTCGGA CTGCCATCTG
GTGGTGGATT ACCTGAAATC CGGGGAATTG CCCCTGCGCT GTACGCACAA TGATACCAAG
CTGAACAATG TGATGCTGGA CGATGTAACC GGAGAAGGCA TTTGCGTGAT TGACCTGGAT
ACCACGATGC CCGGTTCCGC CATTTACGAC TTCGGCGACA TGATCCGGAC GGCTACGTCT
CCCGCCGCGG AAGATGAAAA GGACGTCTCC AAGGTCACGA TGCGCATGTT CATGTTTGAA
GCTCTGGTTC AGGGTTACCT GAGTTCAGCC AAGAGTTTCC TGACGCCTCT GGAAAAGAGC
CTGCTGCCGT TCTCCGGCAA ATTGCTCACG ATGGAATGCG GCATCCGCTT CCTGACGGAC
TACCTGTCCG GTGACGTGTA TTTTAAAATC CACCGTCCGG AACACAACCT GGACCGCTGC
CGCACGCAGA TGGCCCTGGT AGAATCCATT GAGGCGCAGA TGGATGAAAT GAAGGCCATT
GTGGACCGCT ATTAA
 
Protein sequence
MHDLKAVSTL FDLRGDFVHG YSYGSGHIND TYCIWVDQAG QRIRYILQRV NHNVFKQPIP 
LMENVKRVTD HALKRLKEEQ CPEAYRRTLT LVPSVDGKPY ALDSDGNCWR VYPFIERART
YDQIETTRQC QEAARAFGEF QKLTADLPGE PLFETIPNFH NTTSRLAALK EAIQSDPLGR
VKEVQKEIDW YLSRESDCHL VVDYLKSGEL PLRCTHNDTK LNNVMLDDVT GEGICVIDLD
TTMPGSAIYD FGDMIRTATS PAAEDEKDVS KVTMRMFMFE ALVQGYLSSA KSFLTPLEKS
LLPFSGKLLT MECGIRFLTD YLSGDVYFKI HRPEHNLDRC RTQMALVESI EAQMDEMKAI
VDRY