Gene Amuc_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0028 
Symbol 
ID6275196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp36545 
End bp36940 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content54% 
IMG OID642612068 
Producthypothetical protein 
Protein accessionYP_001876656 
Protein GI187734544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.606752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTCT TCAGAGATTC TTCTGCCAAG CAATTGCCTG CGTTTAAAGA TCCCTGTTTT 
GAATTGGCCA TGGCCCGCCG GAAGGAGGAA GCCCGCTGGG GATGGATACC TTTTGCCATC
TTCGTCTTCT TTTTGCTTGT GTACCGCTTC TTTGGCCTTG TCATGCCGAG CAATAATGCG
GACGGCTCGC AGTCATGGCT CTTTTTGCTG GTGCTGGCGG GCTGGGGGCT CCTGGCTCTC
GTCCACATGG TTGTGGTTCC CATCTGGATG CTGATCGCCT CCCTTCATTA CTGGGAGGTG
AACCGCAGGG GATTGGCTGT TGCGGGGCTG CTGTTCAGCA TTTTGGCTCC TGTCAGCATG
GTTTTCATGC TGTCCTGCTG GTCCATGTTT GGATAA
 
Protein sequence
MYFFRDSSAK QLPAFKDPCF ELAMARRKEE ARWGWIPFAI FVFFLLVYRF FGLVMPSNNA 
DGSQSWLFLL VLAGWGLLAL VHMVVVPIWM LIASLHYWEV NRRGLAVAGL LFSILAPVSM
VFMLSCWSMF G