| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0025 |
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| Symbol | |
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| ID | 6275207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 31260 |
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| End bp | 33593 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612065 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001876653 |
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| Protein GI | 187734541 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.688717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAA GGATGATAAA AACGTCCTTC TGGCATCGTA ATAAGTCGAA AAACGCACTG
GTTCCCTCCC ACCTCTTTCT GCTATTATCA AGTAATCCCT TCCACATGAA TATTTCACAT
CTTCTTCTCT GCACTTCCCT GCTCGCGGCT CCCGTCTGCG CGGCACAGGG CCTGACGGAA
ACTGAAACGG AAACGCCGGC CTCCTCCAGC CGCCTGCCGG CGCCCCTGGC ACAAAAAATT
GCCTCCGGAG ACTTTGATGG CCTGCAGACG GAACTGCGCT CCACCCTCCT GAAGGCTGGA
GAACAAACGA AATCCGAACA GAAACTGCTC CAGAACAAGC AGTACCGCCA TTTGCTGGAC
ATTCACGAAC TCCTGCGCGT CACGGGACCG GACAAGGTGA AAGCCGTTTT CTCCAAAAGC
GCGCAAGATG CCGCTTTCAT CAAAACCTTT CTACAGGACC CGGTGTGGAT GGAGCTTTAC
CTTGGAGCAG GCCTGATTCC GGAAAATTCA CCGGAAGGCC TTCAAATCCT CTCCGACATC
TGGAAAGCGG ACGGCAAGAG CCCGGATTTC CGGAATTACC AATCCCTGGC CACCGGGCTG
GCCTCTGTCT TTTCCACCGG CCCCATGGCG GGAAGGCTCA AAACCAACTC CGCCAACAGC
AATCCGGTGC GCCGCTACCG GATTTTCAAA AAACTGCATC AGGAAAACAG GCTGCATCCG
GGATTCATCA AACTGCGCCC ATGGGAAATG CGCTTCGTCG TGGGAAGTCC CTGGGACGAT
AAATCCTATG AATGGAGCAA TGAACACGTC AACCTCCCCT GGCGGCGATA CACGGCCGCC
TGCTGGGCCG CTCCCTATAC GGGCCACAAT TTCTTTGGCG ATACCATTCA GGGGCCCCTT
TTCTACGTGC CGTGGAGGGA TCTTAACACG ACCGCGGAAA ACACGCAGAT CATCGGCGGC
GTTTGCGGCG GCCTCTCCTA TTTTGGCACC ATGGCGGCCC AGGCCCACGG CATCCCCGCT
TATCCGGTAG GACAACCGGG CCACTGCGCG TACGCGGTGC GCGTGAAACG GGGGGAATGG
AAAGGCGGCT TCGGCGGACC AGACGGAGGC ATGCACAACC ATATCTTCGG CTCCCAGGCT
CCTACTTCCT ACCTGCTGAT GGAAAATGTC TTTGCTGACA ACGATAAGGC GGACCAGGCC
TACCTGTGGG CCGCCCAGGC CCGGCTGGAC GAGGCTTCCG GCAACAAGGA CAAGGCCATT
CAGGCATGGG AGGAAGCGCT CAGGCAAACA CCGCTGCACC CGTTCTTCCG CACGGAGCTT
CAACGCCTGC TGATGGAAAA GGAAGGCATG CAACCTGTCG ACTGGTACGT TTACGCCAAG
GACGCCCTTT CCCACTATCA GGGCAACGGC TTTGCCGCAT TCGACATCCT CAAGGACGTG
CAGAATAAAT TCCTGATGGA TATTCCGCCC GCAGACCGGA TTGCCTGGTT CCGGGACCTG
CATGAAGCCA TCGCCACCAC TCCCACATCA TGGGCGGTGA AATTCCAGCC CGTGCTGGAC
TCCCAATCTG CCTTCCTGGC AAATCCGCAG GAAAAAGCGG CCTATCTGGA AACAGTCCTC
TCCACCCACC TGAAAACGGG GGACGGCACC AACTTTGGCC AGGCGTTGGA ATGGGGCGTG
AAAAACTTTG TGGAAAACGG ACAGGCGGAC GTGTTCTCCA ACGCATTCGC CAAGGTAGCC
CAGCAAACGG GAAAAACCGG GACCTCCGGG AAAGCCCCCG ACCCCAAAAA GCTGAAGGAA
GCCTACGGCA AAGCCATCTA TGCCACGGAA ACGGCCCGCT CCATTCCGGC CTTCCAGGCC
TTGAGCAAAG CGGCGGCCTC TTTCTCCGGC GCCAATGCGA CGAACAATAC GGTCAAGGCG
TCCATTCCGC AGGGCTGGAA ACTGGTGCCC GCAGACGGCA TGGTCCGGTG CTCCACCACG
AGCCAGTGGG ACAGCCCCTG GGACCATATC AACCTGCTGC GTCCCTGCGG CGGAGCCCAG
CATACGGATA AGGAAGCCAA TCCGAACGTC ATTGTAGAAC TGAAAAACGG AGTGAACCTG
GCCGGGCTGG TAGTCACCAA GCGCGACGGC AATGAAAACC GGATGAAGAA AATGGAGGTC
TCCACGTCCA CGGACGGAGC CACCTGGTTC CCCCTGGCCG CCACGGAAAA CATGCCCAAG
GAATGGGTCA TCACCGCACC GGAAGGCACC AAAGCCAAGT GGATCAAGGT GGAAGCCAAA
AACGCACAGC CGGAATTCAT GCACCTGCGC CATATCCTCG TTTACGAAAA ATAA
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| Protein sequence | MPRRMIKTSF WHRNKSKNAL VPSHLFLLLS SNPFHMNISH LLLCTSLLAA PVCAAQGLTE
TETETPASSS RLPAPLAQKI ASGDFDGLQT ELRSTLLKAG EQTKSEQKLL QNKQYRHLLD
IHELLRVTGP DKVKAVFSKS AQDAAFIKTF LQDPVWMELY LGAGLIPENS PEGLQILSDI
WKADGKSPDF RNYQSLATGL ASVFSTGPMA GRLKTNSANS NPVRRYRIFK KLHQENRLHP
GFIKLRPWEM RFVVGSPWDD KSYEWSNEHV NLPWRRYTAA CWAAPYTGHN FFGDTIQGPL
FYVPWRDLNT TAENTQIIGG VCGGLSYFGT MAAQAHGIPA YPVGQPGHCA YAVRVKRGEW
KGGFGGPDGG MHNHIFGSQA PTSYLLMENV FADNDKADQA YLWAAQARLD EASGNKDKAI
QAWEEALRQT PLHPFFRTEL QRLLMEKEGM QPVDWYVYAK DALSHYQGNG FAAFDILKDV
QNKFLMDIPP ADRIAWFRDL HEAIATTPTS WAVKFQPVLD SQSAFLANPQ EKAAYLETVL
STHLKTGDGT NFGQALEWGV KNFVENGQAD VFSNAFAKVA QQTGKTGTSG KAPDPKKLKE
AYGKAIYATE TARSIPAFQA LSKAAASFSG ANATNNTVKA SIPQGWKLVP ADGMVRCSTT
SQWDSPWDHI NLLRPCGGAQ HTDKEANPNV IVELKNGVNL AGLVVTKRDG NENRMKKMEV
STSTDGATWF PLAATENMPK EWVITAPEGT KAKWIKVEAK NAQPEFMHLR HILVYEK
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