| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0021 |
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| Symbol | |
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| ID | 6275215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 26737 |
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| End bp | 28134 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612061 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001876649 |
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| Protein GI | 187734537 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG TATCCCTGCA GCATGGAATG ACGCGCCAGA TGGCCGTCTC CCAGTCCATG
CAGACAGGGA TGCAGATTCT TCAGGCTTCT GCTTTGGAAT TAAGGCAGAT TATCCGTCAG
GCGCTGGAAA CCAATCCCAT GCTTGAGGAG TTGCCGGACG CTTCCCCGGA AGCGCTGGAA
GACGGTCCGG ACGGGGATGC CTGGAATGAG CGGGAGGACG GGTGGAACGA GTTTACGGCG
GAAGGCCGCC TGTCTGGGGA CGCGGCCGCC CGCCGTGATT TCATGTATGA ATCCGTCGTG
GCTCCGGAAT CCCTGAAAAC CCATTTGATG GATCAGGCGC AGCATTCCGC ATTGACGGGC
CGCGCCCGGG ACGCCCTGTT CCTGCTGATT GACGCTTTGG ACGAACGCGG GTTTCTGACG
GAGTCTCCGC AGGAGCTGGA AGAGCAGGGG TGTTTCAGCA TGCGGGACAT GGAGGAAGCT
CTGGCTGCGC TGAGGGAAAT GGACCCGCCT GGAGTGGGGG CGGCGAATTT AAGGGATTCC
CTGCTGATCC AGCTTGAACA GCGCGGTTTG AAGCGTTCGC TTGCTTTCCG CCTGGTCAAG
CGCTGCTGGC GGGAACTGGC GGCGCACAAG TATGAGGAAG CCGCACGCCT GCTGGACGTG
GAACCGGGGG CCGTGGCGGC GGCTCTGGAG GTGATTAGGA GCCTGACTCC TGATCCAGGG
GGGGCCTACG CCCCCGGCGG CAACCCTCAT CTGCTGCCTG ACGTCATTGT GGAGGAGGGG
CCTTCCGGCG TGCTGGAGGT TATCCTCACT TCCGAGTATC TTCCGCGCCT GTCCATGAAT
GAACGGTATA TGGAGTTAAT GGCTGAGGGT TCCGGAAGCC GGGAGCTGAG GCAATATCTC
CGCAGGGCGT TCCGTGAGGG ACAGGAGCTG TTGCGGGCTT TGGATATGAG GCAGGAGACC
GTTTTGCGCC TGGCCCGTGT CATTGTGCGG AGGCAGGAGG ATTTTTTCAG GTCCGGCCCG
TCCCGCCTGA AGGCCATGGG CATGGAAGAA GTGGCGGAGG AGATGGGGGT TCATGTTTCC
ACGGTTTCCC GGGCGTGCCG GGACAAGTAC CTGTTGTGCA GGTGGGGGAT GAAAGAATTG
AGATCCTTTT TCAGTGCGGG AGTTCCGTCT GAAGGCGGCG TTTCCCCGGA CGGGGCGGCT
TCCGGAGCCG TGGCTGCCGG CGCCGTCCAA GAGCTGATGC GGCGGCTGAT TGCGGAGGAA
GATTCTTCCA AACCCCTCAG TGACGCCGGG CTGGCGGCCG CGCTGCGGGA AAAAGGGGTG
AACATCGCCC GCAGGACGGT GGCCAAATAT CGGGAGCAGA TGAAGATACT GCCCGCTTCC
CTGCGCCGGG GAATATGA
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| Protein sequence | MSEVSLQHGM TRQMAVSQSM QTGMQILQAS ALELRQIIRQ ALETNPMLEE LPDASPEALE
DGPDGDAWNE REDGWNEFTA EGRLSGDAAA RRDFMYESVV APESLKTHLM DQAQHSALTG
RARDALFLLI DALDERGFLT ESPQELEEQG CFSMRDMEEA LAALREMDPP GVGAANLRDS
LLIQLEQRGL KRSLAFRLVK RCWRELAAHK YEEAARLLDV EPGAVAAALE VIRSLTPDPG
GAYAPGGNPH LLPDVIVEEG PSGVLEVILT SEYLPRLSMN ERYMELMAEG SGSRELRQYL
RRAFREGQEL LRALDMRQET VLRLARVIVR RQEDFFRSGP SRLKAMGMEE VAEEMGVHVS
TVSRACRDKY LLCRWGMKEL RSFFSAGVPS EGGVSPDGAA SGAVAAGAVQ ELMRRLIAEE
DSSKPLSDAG LAAALREKGV NIARRTVAKY REQMKILPAS LRRGI
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