Gene Amuc_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0016 
Symbol 
ID6275225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp20457 
End bp21065 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content57% 
IMG OID642612056 
Producthypothetical protein 
Protein accessionYP_001876644 
Protein GI187734532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CCTCGTTCAT CATCAGGACA CTATGCGCGG GCACCGTCGG TTCCCTCGCC 
TGCCAGGCCG CCATGCAGGC TTACGCGGAT GACGTTCCCT CCACCTTCGT GGAAGGAAAT
TATTCCCCGG AAGTAGCCCG CTACGTGCAG AGCATCGCAG GCGTGGCGCT GGCCTCGGGC
ATTCATGATT ATGACGAAAA CGCCACCAGC AGTTATCAGG TTCTGGCTCA GGTCCTTAAC
AGCGGCAATG TAACGGAATT GCCGGAAGAT CTGAAACGGG CCATTGGAAT GCTGATCGGC
TACGTCCCCG ACCCGAATGA AATCATCCAG CCGATCATGT CCAGAAAACA GATTGAGAGG
ATGAGAAAGA TGGCGGACCG CATCAAGAAC CTGATGGAGG AAAAATACGG AGTGGACCTG
GAAGACTGCA CGAACATCAT GAAGCGCACT CTGGCCCCGT CCATCTCGGA CATCCTCCGC
TCCTGCGGCA TGGAAGGCAC CCAGCTGCCC TCCACCACCG CTTTCCGCCC CAGGCTGGGC
AAGGCTCTGA ATGAAGCCTA TGCCAGGCTT GCGGCGCCAA AACTTCCCGC CGCCGGCATG
GCGCAATAA
 
Protein sequence
MKITSFIIRT LCAGTVGSLA CQAAMQAYAD DVPSTFVEGN YSPEVARYVQ SIAGVALASG 
IHDYDENATS SYQVLAQVLN SGNVTELPED LKRAIGMLIG YVPDPNEIIQ PIMSRKQIER
MRKMADRIKN LMEEKYGVDL EDCTNIMKRT LAPSISDILR SCGMEGTQLP STTAFRPRLG
KALNEAYARL AAPKLPAAGM AQ