| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0006 |
|---|
| Symbol | |
|---|
| ID | 6275243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 6846 |
|---|
| End bp | 8900 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612046 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001876634 |
|---|
| Protein GI | 187734522 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACAT TCCGTTTTAT TCTTCTCATC CTCATCACCC TCGCTTCTGT CGGAGCAGCG
GTGCTCCTCA TGATTGACGG CAATCTGTCC CGCATCATCG GGCGCACCGC TTTCAGTTCC
GGAGAACGGC TTTTCCCGTA CACCCGGGAA GAAATGAACG AGGTTTCCTG GATGCGCATC
AATTGCGTGG GAGATGTCGC GGAATTCCGC CGCAAACCCA ACGGCGTCTG GTGGTGCGAA
AAGCCCTGGA ACGACCGTAT GGATCCTCGC GCGGCGGCGG CCATTCTCCA GTACACGTAC
TCCACCAGCA TCGTGGACGC ATTGCCCCTG CACAAGATTG ATTCCGCATC CCTGAAGGAA
TTCGGCGTGA AAACCACTCC CGTTACCATC ACTCTCAAGG AAATGAGCGA CGACGGAAAG
CGTTCCTCCA CTGTGGCGCG CTATACGCTG GGTTCCCCGG CGCCCTGGCT GGTGGACGAT
CCGGAGAACA AGACCACGGA TGACACCACC TATATGCAGA CGGATTTTTA CGGCCGGGAC
ACCCGCATTC TGGTGGGCAC CGGCAACATC CTCCCTCTGT TCAAATCCGG CATCCGCCAG
CTTCGGGACC ACCGTCCCCT GCTACTGCAT CCGGCCATGC CCGCCTCCAT TGAAATCAAC
AACCGGGGCC AGCGCATCGC CCTGGAGCGC AAGACTCCTG GCTCCCCCTG GAAAATCACG
TATCCCCTCT CCCTGGATAC GGACCCGGCC ATGATGGATG TGCTGCTGGG CACGCTCCAG
AAGCTGACCG CCGTGCGCGT GTACAACCCG GAGGAAACGA GCGTGCCGGA TATGACGGAT
GATCAAATCA CCTCCGTCTC CATCAGGAAT TTCACAGGCC GCCTTTCAGG GGACGGCAAA
TCCCTGCAAA TGGAGGAACA GCCCGTCACG CTCCGGATTT ATCCTCCCTC GGACAACGGA
AGCCTGTCCG AACTGGTCAA AGCCACCGTT TCCGACCGTA AGGCCGTCTT TGAATTGGCG
CAAACGACGG AAACCAACAA GGAAGTTCCC GGCGTACGCA ATATTCCGCT GGATCTGGGC
CTTCTGCGTT CCAAGCAATT GACGGACATC GGGGATTACA AGATTACCGG CCTTTCCATC
CGTAAAAGTT TTCAGGATTA CCCTACCATC GCCCGCTTCA TTCAGGGGGA TGAGAAAAAA
GGCATCAAGC CCACCTGGCT GTACACGGTA GAGGGCGCCC GTTACCAAGA AGCTAATCCG
GAGCATCTCA TTTCCCTGCT GAAAACCGTT AAACAGGGAA AAGTGGCCGG CTTCGCTTCG
GACAAAGTTA CGGACCTTTC CGTGTACGGG CTGGATAATC CCAGAATGAC GCTCACCATG
TCCCTTCTGC CCAAGCCCGG TGAAGAGCCA CGCCCCCCCG TGACGGTGTT TTTCTCCAAG
GGTGCGGACG GTTCCTGGTA TGCCCGCCAG GCCGGAAAAC CCACCGTCGC CATACTGGAC
AACGCCTACA TGAAGGATTT GCTGACGGAT GCACTGGCCT GGAAAAAAAA GAGGCTTTTT
TCCTTCAGCA GGTTTGACCT CAGAGAAATG CACCTGGAAC GCATCGGTTC CGGAGGCCCC
CTGGTTCTGA AATTCGACCG TCTGGACGAT TCTTGGACAG CCTCCAAAGA CGGGAAGGAT
GAAACCTTGA ATATCAACCC GAACCGCGCC AACCGCTATC TGGATGAACT GGAAAAAATG
GAGGTGAGCG CCTGGCTCCC CTATACGGAC GCCACAGCGC ATGAAGCCCT GAAAAATCCC
GTTTTCCGCC TGAAACTCAT CCTCCAGTCT TACAAGGAGG CGGCCCCCGT GCAGTCCCAA
TCCGGTTCCA GCGACATTAC CTTTGCCCCG GAACCGGAAA CGGAGGACAA AGTCATCACG
CTGGAAATCG CCCCGGCGGG AGAGGCCGGA TACAGCAGAT TTTATTACGG CAGAGTAAAT
ACAACCCCGA ATTATTTTAT CCTGAACATG GACGCCGTAC GTCTGCTCGG CGCCAGCCTT
TCGGAAGACA ACTAA
|
|---|
| Protein sequence | MRTFRFILLI LITLASVGAA VLLMIDGNLS RIIGRTAFSS GERLFPYTRE EMNEVSWMRI
NCVGDVAEFR RKPNGVWWCE KPWNDRMDPR AAAAILQYTY STSIVDALPL HKIDSASLKE
FGVKTTPVTI TLKEMSDDGK RSSTVARYTL GSPAPWLVDD PENKTTDDTT YMQTDFYGRD
TRILVGTGNI LPLFKSGIRQ LRDHRPLLLH PAMPASIEIN NRGQRIALER KTPGSPWKIT
YPLSLDTDPA MMDVLLGTLQ KLTAVRVYNP EETSVPDMTD DQITSVSIRN FTGRLSGDGK
SLQMEEQPVT LRIYPPSDNG SLSELVKATV SDRKAVFELA QTTETNKEVP GVRNIPLDLG
LLRSKQLTDI GDYKITGLSI RKSFQDYPTI ARFIQGDEKK GIKPTWLYTV EGARYQEANP
EHLISLLKTV KQGKVAGFAS DKVTDLSVYG LDNPRMTLTM SLLPKPGEEP RPPVTVFFSK
GADGSWYARQ AGKPTVAILD NAYMKDLLTD ALAWKKKRLF SFSRFDLREM HLERIGSGGP
LVLKFDRLDD SWTASKDGKD ETLNINPNRA NRYLDELEKM EVSAWLPYTD ATAHEALKNP
VFRLKLILQS YKEAAPVQSQ SGSSDITFAP EPETEDKVIT LEIAPAGEAG YSRFYYGRVN
TTPNYFILNM DAVRLLGASL SEDN
|
|---|
| |