Gene Amuc_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0004 
Symbol 
ID6275247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp4429 
End bp5211 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID642612044 
Producthypothetical protein 
Protein accessionYP_001876632 
Protein GI187734520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.750522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCAG TACTTACCAT TTTCAGAAAA GAACTCAGAA GCTACGTAAT GACTCCGTAC 
GGATGGGTTA TCCTGGCTTT CGTCATGGCC CTTCAGAGCG TCTCCCTGTC CGGCACGCTG
AAGGCTTTTC AACTGGCCCC GCAGAAGGAA GGCATCCTGT TCTTCATCCT GCATTCTCCC
ATGTTCTGGT TTTACTTCCT GTTCATCTTC CCTCTGCTCA CCATGCGTTC CCTGGCGGAG
GAGGAAAAGA CGGGAACACT GGAATCCCTG CTCACCACGC CCATCAAGAC ATGGCAGGTG
GTTCTGGGAA AATACTTCTC CGCATACGCC TTTTACATCA TCCTGTGGCT GCCCATGCTT
CTCTATCCCA TCCTGGCGGA CTGGTCCAAC CTGATTGTGC AGTGGATTTA CGGATATGAC
GCGGGCATGG TTCTGCCTTA CCGCCTGGCG GACTGGGCCG GGGCATACGC CATTCTGCTG
CTGGTCGGCG CCTGGTTCAC GGCCATCGGC ATTTTCGCCT CCTCCATGAC GGGCAGCCAG
ATTATTTCCG GCATCATCAC CATCGGCCTG CTGGTCCTGA TTTTCTTCAT GGGTCTGATT
CCCGTGGTGT GGGGGGAATT CCCCGCAGCG GGGATTTTCC ACTACATGTC CTGCTCGGAA
CATCTGGACC GCTTTTCCGC CGGGCTGGTT GACACGCGCC CCGTCGTGTT TTACCTGACC
ATGACAGTCC TGACGCTGGC CGTCACCATC CGCATCATTG ACCACCGCCG CTGGAAACAC
TGA
 
Protein sequence
MSPVLTIFRK ELRSYVMTPY GWVILAFVMA LQSVSLSGTL KAFQLAPQKE GILFFILHSP 
MFWFYFLFIF PLLTMRSLAE EEKTGTLESL LTTPIKTWQV VLGKYFSAYA FYIILWLPML
LYPILADWSN LIVQWIYGYD AGMVLPYRLA DWAGAYAILL LVGAWFTAIG IFASSMTGSQ
IISGIITIGL LVLIFFMGLI PVVWGEFPAA GIFHYMSCSE HLDRFSAGLV DTRPVVFYLT
MTVLTLAVTI RIIDHRRWKH