| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_1508 |
|---|
| Symbol | |
|---|
| ID | 6263938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 1601122 |
|---|
| End bp | 1602270 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642611996 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001876393 |
|---|
| Protein GI | 187251911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0000162544 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAACA TTGTGCCTAC AAGCAAAAAT ATTTTAGTTG TAGCGGGTGA TGTAAGCGGT
GATTTGCACG CAAGCAATCT TGTGCGTGAA ATTAAACGCA TTAATCCCAA CGTAAAGATT
ACCGCTTTAG GCGGTAAAAG ATTGAAAGAA ACGGCGGATA ATTTTTTATT TGATTTAGCT
TCAAAAGGCG CAAGCGGCTT TGTGGCCCCT TTAGTTAAAC TGCCGCTATG GATAAAACTT
TTAAAAATGG TTCGCGGGTA TTTGGATTCA GAACAGCCAG CGTGTGTTAT AGTTGTTGAT
TTTTACGGTT TTAACTCGCA GGTTTTGGGC ATGGCAAAGC ACCGTAATAT TCCTTGTTAC
TATTACGTAG CTCCGCAAGT TTGGGCAAGC AGGCACAACC GTACCAAAAC CATAGCGTCC
AGCACAAAAA AAGTTATTAC AATATTTCCT TTCGAACCGG CGTTCCATGC CAAATACGGC
AGCAACGCCG TATTTTTGGG AAACCCGCTT TTAGATATTG TTCCGCAGCC TAAAGAACAT
GTTTTTGACG GCACTTTCCG TTTGGGTATT TTGCCCGGCA GCAGAGTAGG CGAGTTAACG
AAACACACTG ATTTATTTTA CAAAACATTT AAAGAAGTTC AAAAAATATT TCCCAATACA
AAGGCGTATT TGTTTTGCGT GCCTGAGTTT AGCGATGAGT TTTACCTGTC TTTAATTAAA
GACAGCAATC CGCAGGTTAC GCTTGTGCGC GAAACGGACT ATAAAGAGCG CGGCAACATG
GATTTCCTTA TAACCTGTTC CGGCACCGCC ACTTTGGAAA ACGCGCTTTT AGGCGTGCCT
ATGCTGGTAG CTTACAAAAT GTCCTCCATC ACTTTTAAGG TGGCTAAAGC GGTTATAAAA
GTGCCCTACA TATCGCTTGT TAATATTTTA GCGGGTAAAG AAGTGGTAAA GGAATTTATA
CAACATTTTG CCACGGCAAA AAATTTATCC GCGGAAGTTA TGTCTTATTT CCAAAATCCG
CAAAAAACAA AAAAAATGCG CGAGCAACTT TTGAACATAA GGAAAACATT GGGTGATCCG
GGTGTTGCCA AAAGAGCTGC CGAGCTTATT TTAAACGACG TATTCGCTAA CAAAAAACAG
GTTTTATGA
|
|---|
| Protein sequence | MPNIVPTSKN ILVVAGDVSG DLHASNLVRE IKRINPNVKI TALGGKRLKE TADNFLFDLA
SKGASGFVAP LVKLPLWIKL LKMVRGYLDS EQPACVIVVD FYGFNSQVLG MAKHRNIPCY
YYVAPQVWAS RHNRTKTIAS STKKVITIFP FEPAFHAKYG SNAVFLGNPL LDIVPQPKEH
VFDGTFRLGI LPGSRVGELT KHTDLFYKTF KEVQKIFPNT KAYLFCVPEF SDEFYLSLIK
DSNPQVTLVR ETDYKERGNM DFLITCSGTA TLENALLGVP MLVAYKMSSI TFKVAKAVIK
VPYISLVNIL AGKEVVKEFI QHFATAKNLS AEVMSYFQNP QKTKKMREQL LNIRKTLGDP
GVAKRAAELI LNDVFANKKQ VL
|
|---|
| |