Gene Emin_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1495 
Symbol 
ID6264005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1589299 
End bp1589802 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID642611981 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001876380 
Protein GI187251898 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.70798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.112729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTCACACT GATAGAGTTG TTAGTGGTTG TTTTAATAAT AGGTATTTTA 
GCCGCTATAG CGTTGCCGCA GTATAATAAA GCGGTCGCGA AGTCGCGCAT GGCGGAGGCT
ATGGTTAACG GCAAAGCTTT TATGCTGGCT TTAGAAAGGC ATTATCTTAT GACCTCGGAA
AGCCCTACTT TTGAAAGTCT GGATATAGAA TTACAAGGCG CGGTAAACAC CGGGGCAAAC
GAGCATGCGC TTGATCATAT AACCCATAAT AAAATGTCCT ATGAAATAGG TAACGGCGGT
AAATTTATAA GAATTGTTCC CAGAGCTTCG GCCGGGCCTA TAGCCGGCAT GCAGCTTCAC
TATCACAGGG ACGGGCAAAT CTACTGTTAT TCCCATAAAG CGGGCGCCAA TGTTGATTTT
CAGGAATCGG TATGCAAAAC ATTAGGAGGC ACTGAATTCC CAAGTAAAGA CACGGCAAAC
CACAGCGCTT TCAAATTGCA ATAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYNK AVAKSRMAEA MVNGKAFMLA LERHYLMTSE 
SPTFESLDIE LQGAVNTGAN EHALDHITHN KMSYEIGNGG KFIRIVPRAS AGPIAGMQLH
YHRDGQIYCY SHKAGANVDF QESVCKTLGG TEFPSKDTAN HSAFKLQ