Gene Emin_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1486 
Symbol 
ID6263746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1583116 
End bp1584759 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content45% 
IMG OID642611971 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001876371 
Protein GI187251889 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0544348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.78321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TAGACGTCAC AACACGTAAT TTGATGTTAG ACAGCTTAAG ACATTACGCC 
AAAGACAATA TTTCGTTTAA CTTTATTAGA GAACACGACG CGAAAAACGA AATTCCCCTG
CCTCTTTTAA AAGAGATGTA TGACCCTAAA ATTTTAGGAG TTCACCTTTT ACTTATTCCC
ATAGAATACG GCGGTTTAGC CGGCAGCACT ACCGATATTT ACAGAGTTTG TGAAGAACTT
GCCAGAATCG ATCTTGGCAT AGCCACTTCC GTATTTGCCA CTTTTTTAGG TTCCGACCCG
CTTAACGTAG GCGGTACCGA AGCGCAAAAA GCAAAGTGGT TCGGCAAAAT AGCCAAAGAA
CAGCTTTTGG TAGCTTACGG CGCCACTGAA GCCGATGCTG GCAGCGACCT TGTTTCTTTA
AGAACTCGCG CAGAACACGT GCTTAACCCC GACGGTACTT TAAAAGGTTA TAAAATTACG
GGCAGCAAAA TGTGGATTTC AAACGGCGGC GTGGCTGATA TTTACACTGT TCTTGCTATC
GCTCCCGGCG GGCCTTCCTG GTTTATTGTT GAAAAAAACA CTCCCGGTTT TACCTCAGAC
GCTCACGAAG ACAAACACGG TATAAGGCTT TCTAATACGG CAGGCTTATC TTTTGACGAT
GTTTACGTTC CCGTTGAAAA TTTAATAGGC CTTAAAGAAG GACAGGGCTT ATTGCAGGCG
CAGGCTGTTT TCGGTTATAC CCGTTTAATG GTTGCCGCTT TTGGTTTAGG CGCCGGTGAA
GAAGCGACTG AAACCGCAAT CCATTACGCT CAGCAGCGTA TACAGGCGGG CGGCCCGTTG
GTTGATAAAC AAGGCTATAT GCTTAAGCTT ATCACCCCGC ATTATATCAG GTTTGAGGCG
GCCAGGGCTT TTATTGACAA TACCGCTAAA ATGCTTGATG ATAATAACCA CGGCTTCGCC
ACGGAAGGCG CCATAGCAAA ATATTACGCT ACCGAAGAAG GCAATAACGC CGCTGAACAC
GCTATACAGG CTTTAGGCGG ATTTGGTTAT ACAAAAGAAT TTTCCGTTGA AAAAATTAAA
CGCGACGTAA AAATTACCAT GATTTATGAA GGCACAAATG AAGTCATGGA AATGACTATT
TACAGAGGCC GCTGGCAGGA ACATTTAAAG AGCCGCGGGC AATACTATAT TGATATGGCG
GCCCAGCTTG AAGCAGCCCA CGCCAAAAAC CCAAATGTGG GTGCTGACAG CATGGCTTTG
GGGCTTAAAG CTCTTGCCAA AGTTTTGGAA GAATGCAGAC TGCAAAAACT TACACGCCAC
CAATTTATAA CATTCAAACT CGGCGAACTT ATAGCTAACG CGGAAGTAGC CGCCGTTTTT
GTTAAACGCT GCGCCGAAGG CATTGTTACC GAAGGCAGCC GCTTTGATAT CGGCACATTG
CAGGCAATGT CTCGTGTGTT GGGCAGGGAA TGCGCCTTTG ATATCGCCAC AAGAGGTTTA
AAATACGTTA TTGGCGCGGG CACGGGTAAT GCCGCCCAGT TAAGCCAGGA CGTAAACCTT
GTAGAGATAG AAGACAAAAT GCGCGGCACT ATTGAAGACA GCGACATTGT GTCAGCTAAA
TTAAAAGAAA TTTTCAAAAA ATAA
 
Protein sequence
MAKIDVTTRN LMLDSLRHYA KDNISFNFIR EHDAKNEIPL PLLKEMYDPK ILGVHLLLIP 
IEYGGLAGST TDIYRVCEEL ARIDLGIATS VFATFLGSDP LNVGGTEAQK AKWFGKIAKE
QLLVAYGATE ADAGSDLVSL RTRAEHVLNP DGTLKGYKIT GSKMWISNGG VADIYTVLAI
APGGPSWFIV EKNTPGFTSD AHEDKHGIRL SNTAGLSFDD VYVPVENLIG LKEGQGLLQA
QAVFGYTRLM VAAFGLGAGE EATETAIHYA QQRIQAGGPL VDKQGYMLKL ITPHYIRFEA
ARAFIDNTAK MLDDNNHGFA TEGAIAKYYA TEEGNNAAEH AIQALGGFGY TKEFSVEKIK
RDVKITMIYE GTNEVMEMTI YRGRWQEHLK SRGQYYIDMA AQLEAAHAKN PNVGADSMAL
GLKALAKVLE ECRLQKLTRH QFITFKLGEL IANAEVAAVF VKRCAEGIVT EGSRFDIGTL
QAMSRVLGRE CAFDIATRGL KYVIGAGTGN AAQLSQDVNL VEIEDKMRGT IEDSDIVSAK
LKEIFKK