| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_1436 |
|---|
| Symbol | |
|---|
| ID | 6263515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 1528365 |
|---|
| End bp | 1528880 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642611916 |
|---|
| Product | Tfp pilus assembly protein PilE-like protein |
|---|
| Protein accession | YP_001876322 |
|---|
| Protein GI | 187251840 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAG GTTTTACATT AATAGAATTG TTAGTAGTGG TGCTTATTAT AGGCATTTTG
GCGGCAATAG CTTTGCCGCA ATACACCAAA TCAGTTGAAA AAAGCAGGTT CAGCCAGGCT
TTTATTTTAG TTTCAGCCTT AGGCCGCGCG CAGGAAAGAT ATGTTTTAGC TGCCGGAACT
CCCGCTTTTA CATTTGATGA CTTCGATGTG GACCTTCCCA CAAAAGCCGT ACCGGGAACT
GTAACCGGCA ACCTTTCCCA CAAGGCGGGC GGCGCTCTTA CAGACAACCT TTTTGATTAT
GTTATAGATT CCGTTAATTC GCCCGTTTGG TACGGAACAC CTACTGTGGT ACGAAACAGC
GGTAACTATA AAGGCGGCGG CTTTATATAT TCGCAAGGCA GAATTTATTG CGTTGAAGGG
GCCGGCAGCA CAAAGCAGTT TTGTAAAAAG TTCTATAATG GAACCCTTTA TCTTCCTTCT
CAGTCCGGGT GGGATATTTA TACAATTCCT TATTAA
|
|---|
| Protein sequence | MKRGFTLIEL LVVVLIIGIL AAIALPQYTK SVEKSRFSQA FILVSALGRA QERYVLAAGT
PAFTFDDFDV DLPTKAVPGT VTGNLSHKAG GALTDNLFDY VIDSVNSPVW YGTPTVVRNS
GNYKGGGFIY SQGRIYCVEG AGSTKQFCKK FYNGTLYLPS QSGWDIYTIP Y
|
|---|
| |