Gene Emin_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1387 
Symbol 
ID6263290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1489221 
End bp1489748 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID642611867 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001876273 
Protein GI187251791 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTT TTTCAATTTT TTATATTAAA AAAAATAACG CTTTTACTCT TATAGAACTG 
CTTGTTGTTG TGCTCATTAT AGGCATTTTG GCGGCCATTG CTTTACCACA ATATACAAAA
GCCGTGGAAA AGAGCCGCGC GGCGGAAACG CTTCTTGTGG GAAGGGCTAT TAAAGACGCT
CAGGAAAGGT ATTTTTTATC AACAGGTTCA TATACCACTA AGTTTGAAGA CTTAGATATT
GACATACCGG GCACATCTTC TTCAGAAGGT GTTGTATTTA CTTTAAAAAA TTATAAATAC
AGTTTAAGTA ATACCACCCA CATTTACAGC GTGCCTAATA AAAACTCTTT TAACCACTGG
TTTGATTACT GCTACAATAA TATAACACCT TATAGTTCTT GCCCGCAGCC GGGCGCGACA
TATTGTGTTT ACAACTACGG AACCGACGGG GAAAGACTTT GTAAAACTTT TGGCACATCC
GCCCCGATAG CAGGCGGAAA TTCAACTTCA AGAATAAAAG TTAATTAA
 
Protein sequence
MRFFSIFYIK KNNAFTLIEL LVVVLIIGIL AAIALPQYTK AVEKSRAAET LLVGRAIKDA 
QERYFLSTGS YTTKFEDLDI DIPGTSSSEG VVFTLKNYKY SLSNTTHIYS VPNKNSFNHW
FDYCYNNITP YSSCPQPGAT YCVYNYGTDG ERLCKTFGTS APIAGGNSTS RIKVN