Gene Emin_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1327 
Symbol 
ID6263171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1428620 
End bp1429852 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content47% 
IMG OID642611806 
Productserine dehydratase alpha chain 
Protein accessionYP_001876214 
Protein GI187251732 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00016553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAATTA ATATGAAAAC ATTGAGAAGT CTATACCGTA TAGGAATGGG GCCTTCAAGC 
AGCCACACAA TGGCGCCGAG GAGAGCTGCC CAGGAATTTG CCGCGGAAAA CGAGTCCGCC
TGCTCATTTA GAGTTACTTT GTACGGCTCG CTGGCTTTAA CGGGCCGCGG ACATTTAACC
GACCATGCTA TTAAAGACGG AATGTCCCCC AAAACAGTTG AGATTATATG GCAAGGCGAT
ACTTTCTTAC CCTTCCATCC CAACGCTATG AAGTTTGAAG CGCTTGACCA AACAAGCAAA
GTATTAAGCG AAAAAACGCT TTACAGCATA GGCGGCGGGG AAATATCCGA CGGAACTATA
CCTAAAGAAG ATGAAAAATC AATTTATCAG CACGGGTCGA TGGAAGAAAT TTTAAAATAT
ACGGCTCAGC AAAAAATTGC CCTTTGGGAA TATGTGGAGG AATGCGAAGG TAAAGAGATT
TGGCCTTTTC TTTATACAGT TTGGGAGCAA ATGCAGGCCG CTATAAATAA CGGCATTGAG
AGACGTGGTA TTTTGCCCGG CGAACTTAAT TTGGAAAGAA AGGCCCGCAG GTTTTTTAAA
AAAGCGGAAA CCGCCCCCAG ATACGTACGC CGCATTAATA CCGTTTTTGC TTACGCGCTT
GCCTGCGCGG AAGAAAACGC CAACGGCGGG CAGGTTGTTA CCGCCCCCAC TTGCGGAAGC
TGCGGCGTTG TGCCCGCTGT ACTTCGCATT ACAAAAGAAA TTTATGATTA TGATGATAAG
GCTGTTGTCT GCGCTTTAGC AACAGCCGGC CTTATAGGAA ACCTTGCTAA AACAAACGCA
TCAATATCAG GCGCTGAAGT AGGCTGCCAG GGTGAAGTGG GCGTTGCATG CGCGATGGCC
GCCGCCGCAG TATGCCAGCT TGAAGGCGGC GATAATAAAA GCGTAGCGTA CGCGGCCGAA
ATGGGCATTG AACACCATTT GGGACTTACG TGCGACCCTG TGGCCGGGCT TGTGCAAATA
CCCTGCATAG AAAGAAATGC TTTAGCCGCC GTACGCGCCA TAGATTGTGC TACGTTTGCC
ATAACCTCTG ACGGAGAGCA TAGCGTCTCT TACGATGAGA TTTTGCAAAC CATGATGCAA
ACCGGCAAAG ATATGAAAAG CGATTACAGG GAAACATCTT CCGGCGGACT TGCGAAGTTT
TTTAAAAATA AATTTTTTAA AGGAACTGAA TAG
 
Protein sequence
MLINMKTLRS LYRIGMGPSS SHTMAPRRAA QEFAAENESA CSFRVTLYGS LALTGRGHLT 
DHAIKDGMSP KTVEIIWQGD TFLPFHPNAM KFEALDQTSK VLSEKTLYSI GGGEISDGTI
PKEDEKSIYQ HGSMEEILKY TAQQKIALWE YVEECEGKEI WPFLYTVWEQ MQAAINNGIE
RRGILPGELN LERKARRFFK KAETAPRYVR RINTVFAYAL ACAEENANGG QVVTAPTCGS
CGVVPAVLRI TKEIYDYDDK AVVCALATAG LIGNLAKTNA SISGAEVGCQ GEVGVACAMA
AAAVCQLEGG DNKSVAYAAE MGIEHHLGLT CDPVAGLVQI PCIERNALAA VRAIDCATFA
ITSDGEHSVS YDEILQTMMQ TGKDMKSDYR ETSSGGLAKF FKNKFFKGTE