Gene Emin_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1300 
Symbol 
ID6263268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1402394 
End bp1402870 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content40% 
IMG OID642611779 
Producthypothetical protein 
Protein accessionYP_001876187 
Protein GI187251705 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA ATAAAAAAGC GTTTACTTTA ATAGAAATAT TAATTGTTAT GGTTATTGTA 
GCCGTTTTAG CGGCGATAGC CTTGCCTAAA TATATTGACA CCGTAGATTC CGGGCTTGCC
AAAAAGGCTT ATGATGCGAT GCAAATGGTG TATGCGGCGC AGTTAAGATA CTCGGCTGAA
AGCCCCAGCG GCGCGTTTAC AAAAAACTTT AAATTGTTAG ACGTTCAATT CCCGTCAGCC
ACAATCAGCG GTACGGATAA TAACAAGCTT GACTTCAATA AATTTGCTTT GGAGTTAACA
ACATCGGAAG TTAAAACCGT GGATTTGGAA CATATTCAGC TTGTTCTTAA CTTCCAGAAC
CAAACAAAAA GGTGTAACGT TACGAGCGCG TCAAATGTGT CTAAAGGGCA AAGAGTTTGC
GTTTCTTTGG GCGGCATGCT TGTGACAGGG CAAACAAAAA TTTACAATTT GCCGTAG
 
Protein sequence
MKINKKAFTL IEILIVMVIV AVLAAIALPK YIDTVDSGLA KKAYDAMQMV YAAQLRYSAE 
SPSGAFTKNF KLLDVQFPSA TISGTDNNKL DFNKFALELT TSEVKTVDLE HIQLVLNFQN
QTKRCNVTSA SNVSKGQRVC VSLGGMLVTG QTKIYNLP