Gene Emin_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1280 
Symbol 
ID6264014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1381296 
End bp1381754 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content44% 
IMG OID642611759 
Producthypothetical protein 
Protein accessionYP_001876167 
Protein GI187251685 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ATAAAGGTTT CACATTAATC GAACTTCTCG TTGTAGTTCT TATTATTGGT 
ATCTTGGCCG CGATAGCGCT GCCCCAGTAT ACCAAAACAG TTGAAAAGTC CCGCGCAGCG
GAGGCTTTAC TCAACCTTAA AGCAATATCA GACGCAGCCA ACAGATTCTA CCTCATGAAT
AATACATATA ACGGTATTGA TATTTCTGCT ACCGGTAATT TAGATATTGA ACCGCCTGCT
ACTACAGCAA CGTCAAAATT TGACTATGTT GCCACGCCCG CCAGCCCTAC GACAACTCTT
ACAATTACCG CTTACAGAAG GGTAGGCACG ACCACAGGGT CAGCCAGCAG CAAACAATAC
TCGATAGCGT TTGTTCTAAC AAACGGCGCT ACCACGAGCA GGACCTGTGC CGTCGGTACG
GGTGATGCGA ATATTTGTAA AGCTCTTAAT ATTAACTAA
 
Protein sequence
MKNNKGFTLI ELLVVVLIIG ILAAIALPQY TKTVEKSRAA EALLNLKAIS DAANRFYLMN 
NTYNGIDISA TGNLDIEPPA TTATSKFDYV ATPASPTTTL TITAYRRVGT TTGSASSKQY
SIAFVLTNGA TTSRTCAVGT GDANICKALN IN