Gene Emin_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1235 
Symbol 
ID6263406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1334675 
End bp1335700 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content41% 
IMG OID642611713 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001876122 
Protein GI187251640 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAT TTATTTTAAG ACGTTTAATA ATGCTTCCTT TTGTTATGTT GGGAGCGACT 
TTTTTACTTT TTTTGCTCAC CCAAACATTA AGTCCGCAAA TGCGCGCTTC ATTATATATA
GAAGACCCGA GGCAAATGGG CTCGCTTGAG GAAGTTATAG AAAAATACGG ACTTAGGGAT
AATGTTTTTA AGCAATACGG CCGCTGGCTG GGCAATATAG TAAAAGGCGA ATTCGGCTAC
AGCCCTACGG CTAACATGCC TGTGGCAAAA GCAATTAAAA AATATTTACC CGCCACGATA
GAGCTTGCTT TGATAACAAT GGCGTTGGTA ATATTCTTTG GCGTATGGCT GGGCGTGGTA
AGCGCGGTAA ACAAAAACCG TTGGCAGGAC AACCTTATAA GAATGTTAAG CGTGGCAACA
TTTTCTTTGC CTATATTTGT GCTTGGCCTT ATACTTCTTA TGATTTTTTA CGGCAAGATG
GGCTGGTTTG CTCCGGGCAG ATATTCTTTC GCTTCCGATT TAATTATATA CGGGCCGGGT
TTTAAACAAC ATACGGGGCT TTTGCTTGTA GACTCGCTTC TTAACGGGCA AATGTCTGTT
TTTTGGGACG CGCTTAGGCA TCTTATTTTA CCCGCCGTTA CTTTATGTGC GGGCTCTTTT
GCTTTAATGA TACGCGTTAT GAGAAGCAGT ATGCTCGAAG AATTAGACAA AGATTATATA
CGCACAGCCA GAGCCAAAGG TTTAAAAGAA AAAGATATTG TTTATAAGCA CGCAGCTAAA
AACGCCGTTA TACCCGTTAT AACGCTTTCA AGCATTCAGT TTATACGCCT TTTAGGAGGC
ACGGTTATTG TTGAAACCAT TTTCGCGTTT CCGGGCATAG GACGTTTTGG CGTTGCCTGT
GCGCAGCAAC TTGATATAGC CGGAATCTTG GGATTTTCCT GCATGGTAGC GTTTTTATTT
GTTATAGGAA ATTTGATGGC CGATATCCTT TATACAGCTT TTGATCCGAG GATACGCTAT
GAATAA
 
Protein sequence
MFKFILRRLI MLPFVMLGAT FLLFLLTQTL SPQMRASLYI EDPRQMGSLE EVIEKYGLRD 
NVFKQYGRWL GNIVKGEFGY SPTANMPVAK AIKKYLPATI ELALITMALV IFFGVWLGVV
SAVNKNRWQD NLIRMLSVAT FSLPIFVLGL ILLMIFYGKM GWFAPGRYSF ASDLIIYGPG
FKQHTGLLLV DSLLNGQMSV FWDALRHLIL PAVTLCAGSF ALMIRVMRSS MLEELDKDYI
RTARAKGLKE KDIVYKHAAK NAVIPVITLS SIQFIRLLGG TVIVETIFAF PGIGRFGVAC
AQQLDIAGIL GFSCMVAFLF VIGNLMADIL YTAFDPRIRY E