Gene Emin_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1217 
Symbol 
ID6263079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1316663 
End bp1317997 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content41% 
IMG OID642611695 
Productcarboxyl-terminal protease 
Protein accessionYP_001876104 
Protein GI187251622 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0468688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA AAATAAACAG ACAGGCAGTT ATAATAGCGG TGGTTTTCTT TTTAGGGACT 
TTATTCCCGT ATGCTTACAG CGGTATTGAT AACGGGTTGC AAAAATTAAA AACATTAGTT
GACGTTATTG AATTTGTAAA GGGAAATTAC GTGGAGGAAA CCAAATTTGA GGATTTGGTT
ACCAACGCGG TAAAAGGGGT TGTTAATAAT TTAGATTTGT TTTCGGAATA TCTTCCGCCG
AAAGATTATA AAGATTTAAA GACGGAAACA AAAGGCGAGT TCGGCGGCGT AGGCATACGT
TTAACACAGG GAGACGGATA TTTGGAAATT TCTTCCCCCA TGCCCGGCAC GCCCGCTTTT
GAGGCAGAAA TCATGCCTAA GGACCGCATT ACGCATATTG ATAAGGAAAG TGTTGCAAAT
ATGACTTTGG AAGAAGCAGT TGAAAAAATG CGCGGTAAGA TAGGTTCCAA AGTAAGGCTT
ACGATAATGC GTAAAAAAGA AAACAGCGAA GAATTTGAAA CTTTGCCTGA CTTTATTTTG
AAAAGAGCTA AAATTGTGCC GGAAGTTGTT TACTACAGAA TGCTTGAAGA CGGTATAGGA
TATATATATG TTATAGATTT TTCCGGACAT ACCATGGAAA AATTAGAGCA GGCTTTAAAG
AGTTTGCACA AACAAGGCAT GACAGGGCTT GTATTGGATT TGCGTTTTAA CCCCGGCGGT
CTTTTGGGCG CGGCTGTTGA TATGGCGGGT AAATTTTTAG GTGAAGAAAA ACTTGTTGTA
TACACGCAAG GCAGACGCCC TATTTACTAT AACGAGTATA AAGCGCCGGT AAAGGCGGAA
TATAAAGATC TTCCGATGGT GCTTTTGGTT AATGAAGCGT CAGCTTCCGG CAGCGAAATT
GTGGCCGGCG CGCTGCAAGA CCATAACAGG GCGGTTCTTA TAGGAGCCAG AACATACGGT
AAAGCAAGCG TGCAGCAGGT GCAGCCCTTG GGGGACGGTT CCGCCATACG TTTGACTATA
GCGCGTTACT ATACGCCTTT GGGCCGTTTG ATACACCGCA ACCATAAAGA TAAAAATTCC
AAAGATACCG GCGGCATAGT GCCTGATATT TTAATTAAAC CCGAAGCGGA AGATTTAAAG
CAAATTTACA CTCTTTATAA TAACGCGGTT CATACTCCAG GTAAAAAAAC AGAGTATGCC
AATATTAACG ACACCGCTTT AGATAAGGCA AAAGAACTTC TTAAAGACCC TGAAAAATAT
GAAGATGTTT TACTAAATTC CCCGGCTAAA AAAGAAGCCG AAGAAAAAGT AAAAAATGAG
GAAGGTAAAA ATTAA
 
Protein sequence
MKNKINRQAV IIAVVFFLGT LFPYAYSGID NGLQKLKTLV DVIEFVKGNY VEETKFEDLV 
TNAVKGVVNN LDLFSEYLPP KDYKDLKTET KGEFGGVGIR LTQGDGYLEI SSPMPGTPAF
EAEIMPKDRI THIDKESVAN MTLEEAVEKM RGKIGSKVRL TIMRKKENSE EFETLPDFIL
KRAKIVPEVV YYRMLEDGIG YIYVIDFSGH TMEKLEQALK SLHKQGMTGL VLDLRFNPGG
LLGAAVDMAG KFLGEEKLVV YTQGRRPIYY NEYKAPVKAE YKDLPMVLLV NEASASGSEI
VAGALQDHNR AVLIGARTYG KASVQQVQPL GDGSAIRLTI ARYYTPLGRL IHRNHKDKNS
KDTGGIVPDI LIKPEAEDLK QIYTLYNNAV HTPGKKTEYA NINDTALDKA KELLKDPEKY
EDVLLNSPAK KEAEEKVKNE EGKN