Gene Emin_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1215 
Symbol 
ID6263359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1314373 
End bp1315581 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content43% 
IMG OID642611693 
Productextracellular solute-binding protein 
Protein accessionYP_001876102 
Protein GI187251620 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000245671 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTATTTT GGATGATGCC AGACTCAGGC TCCAACACAA AAAAGGATTT TGAAAACTTT 
TTACTGCCTT TTAAAAAAGC CAACCCCGGC ATTAATATTA AGGTTGAGTA TATTACGCGT
CATAATTTGT GGAATAAACT TTTTTTACTG AGGTTTGAAA AAAATCCCGG ACAGTTGCCA
GATATTATTG AAATCCCGCA TACATGGACG CCTGTTTTAA CCGCGTCCGA TTTAATAGAA
AATCTTTCGG AACTGGAACC TTCTTTAACT GTAAATAAAT ATTTGGCCCC GCTTGTCTCT
CATTGCTATA AGCAGGGCAC AAAAGATATT TATTCTTTGC CTTGGTGGCT TGATGTTATG
GCGCTTCACT ACCGCGCGGA CCATTTGGCT ACTGTAAGCA AAAACCCTGA GGCGGACTTG
GGCACCTGGC AGGGTATGCT TGATATTTGC GCCAGGTTAA AAACGGAGTT CGCGCATGAT
CCCAACTATT ACCCTATTCA AAACAGCGAC TGGAGGGGAA ACCTTTCCGT AAGAAGTATT
TTACCTTGCA TTTGGGGCAG AGGTTCGGAC TTGTTTTCGC ATGACGGCTC ACGCTGCAAT
TTTACGGAAC CCGCTTTTAT AGACGGGCTT GAAGATTATA TTAAACTGGC CGACCGCGGG
TATCTGCCCG TACTTAGGGA GCGCGGATCT GTAGGAACTA TGGTATCGGG AAGGGCAAGT
TTGTTTATAA CAAGGCGGCA GGGGTTAAGC ATGTTTGAGG CTACAAAAAC CCCTTTTCAA
ATTAACACTT TAAATGTTCC CGCCACGGGT AAAGAAAGCG TGTCCTTTTT ATCAGGCATC
AATTTGGTTA TAACAAAATC AAGCTCTAAA AAAGAAGAGG CCCTTAAATT TTTAAACTGG
CTTATGACGC GTGAGGCGCA GCTTAAATAC GCCTCGCTTA TGGAAGCTTT CCCGGCGGTT
GAAGACACTT TTGATGAATT TATTTTCTCC TCCCCCAAGC GTATGGTTAT ATACGCAAAA
ATTATTGCTA CGGCAAGAAC AATTTCCACA AACATGGTTG CCGCCAGCGC TACAAAAATG
ATTAATGAGG TGCTTGAAAA GGTTTCTATG GAAATTATTA ACGGGCGTTA CGACAGAGAA
TTTCTTGAAC GTGAGCTTGT TCCCATATCC AAAGAGGCGG ATTATCTTCT TAATCTGTAC
GGGGGTTAG
 
Protein sequence
MLFWMMPDSG SNTKKDFENF LLPFKKANPG INIKVEYITR HNLWNKLFLL RFEKNPGQLP 
DIIEIPHTWT PVLTASDLIE NLSELEPSLT VNKYLAPLVS HCYKQGTKDI YSLPWWLDVM
ALHYRADHLA TVSKNPEADL GTWQGMLDIC ARLKTEFAHD PNYYPIQNSD WRGNLSVRSI
LPCIWGRGSD LFSHDGSRCN FTEPAFIDGL EDYIKLADRG YLPVLRERGS VGTMVSGRAS
LFITRRQGLS MFEATKTPFQ INTLNVPATG KESVSFLSGI NLVITKSSSK KEEALKFLNW
LMTREAQLKY ASLMEAFPAV EDTFDEFIFS SPKRMVIYAK IIATARTIST NMVAASATKM
INEVLEKVSM EIINGRYDRE FLERELVPIS KEADYLLNLY GG