Gene Emin_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1199 
Symbol 
ID6263054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1294440 
End bp1296254 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content40% 
IMG OID642611677 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001876086 
Protein GI187251604 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00529725 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATAAAG GTAAATCAAA AACATTATTT TGGGCTATTG TAAAGGTGCT TATGCTTGCC 
GCTTTGCTGC CTGTAATAAT GCTTGGCGTT TATATGGTTG AAATGGATTC ACGTATGATT
AAAGCGGAGC TTTTGGAAAA ACAAAGCATA ATGAACGTGA CCATAGAAAG TAATGTGCGT
GGGTATCTGG GAAGAAAAAG GGGATTTTTG CGTTCTTTTA TATCAATACA TGATACCTTT
TCCGAACATT CCGGCATAAA TAAAATGGAC TTATCTCTTC TTATTTCAAT GAATGAGGAC
GCTGTCGCAG CTGCGTTTAT GGATGTTAAC GGAAATATAA AAGAAGAAGT GGGCGATGTT
AACTTAGCTT TTACCCGCAA TGGTGAATTT AACGCGATAA GATACTTAAC CCTTAATAAA
AAAGAAGACT ACGTGGGTGT TATTACCCGT GAAGATAACA AGGACACTAT GTTGATTGCC
GTGCCTTATG TGTATAACGG TAAGTCAAAG GGCGCGCTGA TAGCCAGGTT TAATATTACG
GAGATGGTAG AAGGCATTGC GGAATATTTT GTAGACGGAG TTTTTTACGC TATTTTTACC
ACTGACGGAA ATATCGTAAC TTCTTCCGGC CCTGTAAGCG AAGATGTTAA AAGGATTATG
GCTTCTTCAC CCGGAAAAAG AAACAGTGAG ATAAAATTCT CGGACGGAAG AAGATATCTT
GTTACAACAA GTATAATAAG CGCCACGGGC TGGATAGTGT ATGTTCAGCA AAGTTCCAAA
AGCTGGACGG CTATTATTTT AAAAGATTCC CACGCTTTGG GTGTAATTTT TATAATGGCG
GTTGCCGTAA TTATTTTAAT AGTGCTTTTA AGTAAAATAG CCATAAAGCC TATTATAGAA
CCTGTTAAAA TTTTACAGGA ATCAGCTACT CTTTTAGGCA AAGGTAATTT TGATTATCTT
CCTAAGCTTG AAAATATGCC CTCTAATGAA GTGGGTGATT TGGGACGGGC TTTCGTAAGC
ATGGCGGAAA GTCTTAAAAA ACAACGCGAG GAAGTTGCCA AAGCGGAAAA AGAACTGGCG
GACACAAACG CTATTTTAGA GAAAAAAGTT GAAGAACGCA CCAAGCAGCT TGGCAAAGCG
ACTGACGCTT TAGTTAAAAA AGAAAGGCTT GCCGCTATAG GGGAAATGGC GTCTATTATC
AGTCATGAGA TAAGAAACCC GCTTGCTGTT ATAAGCAATT CAACGCATCT TATACGCGCT
ATTGTAGGGG AGGAAAACCC CAAACTTAAA AGACAGTTTG ATATTATAGA CAGCGAAGTA
AGGCAGGCCA ACAGAATTGT TGAAGAGGTT TTAGGCTACG CCAGAGACCG CAAACAAAAT
ATTACACGCG TGGATTTGAA CTCATATTTA AAAGATATCG TTACTACCCA TCCATTGCCG
CAAGGTATAA GAATTGTTCA GAATTATGAT GAAACTCACC CTGCCGTTAA CATAGATTCT
GAGGAAATTA AACAGGCCGT GCGTAACCTA ATAACTAACG CATTTGATGT TATGCCTGAC
GGCGGCACAT TAAATATAGG AACGAAAGCA GGCAAAAAAG TTGTTTGTTT ATATGTGTGC
GACGAGGGCA CAGGTATGGG GGAAGATACT TTGCTTAGAA TATTTACGCC GTTTTTCACT
ACCAAGGCGC GTGGCACCGG GCTTGGTTTA GCCGTGGTAA AAAAAGCGGT ATCAAACAAC
AAAGGTAAAA TGTTTGTTGA AAGCGAGCCT GACCAGGGCA CTAAATTTAA AATATATTTA
AAGAGGGCAG AGTAA
 
Protein sequence
MYKGKSKTLF WAIVKVLMLA ALLPVIMLGV YMVEMDSRMI KAELLEKQSI MNVTIESNVR 
GYLGRKRGFL RSFISIHDTF SEHSGINKMD LSLLISMNED AVAAAFMDVN GNIKEEVGDV
NLAFTRNGEF NAIRYLTLNK KEDYVGVITR EDNKDTMLIA VPYVYNGKSK GALIARFNIT
EMVEGIAEYF VDGVFYAIFT TDGNIVTSSG PVSEDVKRIM ASSPGKRNSE IKFSDGRRYL
VTTSIISATG WIVYVQQSSK SWTAIILKDS HALGVIFIMA VAVIILIVLL SKIAIKPIIE
PVKILQESAT LLGKGNFDYL PKLENMPSNE VGDLGRAFVS MAESLKKQRE EVAKAEKELA
DTNAILEKKV EERTKQLGKA TDALVKKERL AAIGEMASII SHEIRNPLAV ISNSTHLIRA
IVGEENPKLK RQFDIIDSEV RQANRIVEEV LGYARDRKQN ITRVDLNSYL KDIVTTHPLP
QGIRIVQNYD ETHPAVNIDS EEIKQAVRNL ITNAFDVMPD GGTLNIGTKA GKKVVCLYVC
DEGTGMGEDT LLRIFTPFFT TKARGTGLGL AVVKKAVSNN KGKMFVESEP DQGTKFKIYL
KRAE