Gene Emin_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1180 
Symbol 
ID6262897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1277442 
End bp1278680 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID642611658 
Producthypothetical protein 
Protein accessionYP_001876067 
Protein GI187251585 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAATT TTATTACCAC TTACACTGTT GCGCGTATAG CGATAAAAGC CATTTGGGCT 
AATAAAATGC GTTCCGCCTT AACCAGCTTA GGTATAATTA TAGGCGTGGG CGCGGTTATC
GCTATGACGG CAATAGGCGC GGGCGCCAGT AAAGATATTT CTGACAGAGT GGCTAAAATG
GGATCTAACA CCATTAACCT TCAGGCGGGC GCTGCTTCCG GCGGCGGGTT TAGCTTTTCA
AGCCAGGCTA AATATTTAAC TACGGATGAT GTCGCCGCCA TAAAAAGGGA AATACGTACA
ATCGATGAAG TTTACGCAAC AATAACACAA AGCAAAAACG TAACCAGCGC CAACACCGGC
ACCATGGCAA GGGTTATGGG AACCACCAAC GAAATTTTTA ACGTTCAACC GTGGTACATA
GCGGAAGGAA GGAAATTTAC GGAAGCCGAA ATTAACGGCG CCGCTACCGT TTGTATTTTA
GGAAGCGAAA CTTCTAAAGA ACTTTTTGCC GATATGAACC CCGTCGAACA GCCCATTCGC
CTTGACGGAC AAATGTATAA AGTTGTCGGT TTAATGAAAG AAGTGGGCGA AGGCTCCTGG
GGTTTTGACC CCGATAACGG CATTATCGTG CCGCTTTCAA CAATGCAGAC GAAATTGGGC
GCGGCGGCAA ACAGGCCCAA ATATGTGCAA ACTATTACCA TTAAAGCCAA ATCTTATGAT
TTAATTTCAG ATACCGAGGA TGAAGTCAAA AAGCTTATGC GCCAGCGCCA TAAGCTTTTA
CCCCGACAGG AAGACGACTT TTACATAAGA AACCTTGCCC AAATGTTAAA CACAATGAAA
GGTATGGCCA CAACAATGAG CCTGTTGTTA GGCGCGATAG CGTCAATATC TCTTTTAGTA
GGCGGCATAG GCATTATGAA TATTATGCTT GTGTCCGTAA CCGAACGCAC AAGGGAAATA
GGTATCCGTA TGGCTATAGG TGCGAGCCTT TGGGATATAA GGCTTCAGTT TTTAATGGAA
GCTATGATAC TTTCAATTTT AGGCGGTATT ATAGGCATAA CGCTGGGGCT TTCAATAGCT
TTCGGACTGG AACATTTTGC CAATATGGTT ATTGAGATAA CATTATCCTC AGTGCTGCTT
TCTTTCTTTG TGTCGGCGGC TATAGGTATT TCATTCGGGT TCTACCCCGC TTACAAAGCA
AGCAAACTCA ACCCTATTGA CGCTTTAAGA TACGAATAA
 
Protein sequence
MVNFITTYTV ARIAIKAIWA NKMRSALTSL GIIIGVGAVI AMTAIGAGAS KDISDRVAKM 
GSNTINLQAG AASGGGFSFS SQAKYLTTDD VAAIKREIRT IDEVYATITQ SKNVTSANTG
TMARVMGTTN EIFNVQPWYI AEGRKFTEAE INGAATVCIL GSETSKELFA DMNPVEQPIR
LDGQMYKVVG LMKEVGEGSW GFDPDNGIIV PLSTMQTKLG AAANRPKYVQ TITIKAKSYD
LISDTEDEVK KLMRQRHKLL PRQEDDFYIR NLAQMLNTMK GMATTMSLLL GAIASISLLV
GGIGIMNIML VSVTERTREI GIRMAIGASL WDIRLQFLME AMILSILGGI IGITLGLSIA
FGLEHFANMV IEITLSSVLL SFFVSAAIGI SFGFYPAYKA SKLNPIDALR YE