Gene Emin_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1179 
Symbol 
ID6263740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1276733 
End bp1277440 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID642611657 
ProductABC transporter related 
Protein accessionYP_001876066 
Protein GI187251584 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA TTAAATTTAA AAATTTAACC AAAGTTTACA CGCTTGGCGA AATACAGGTG 
CACGCTTTAA ACGATGTGTC TTTAACCATA GAATCAGGCG AGTTCGTAGC CATTATGGGC
CCCAGCGGCA GCGGCAAAAG CACGTGTATG AATATTTTGG GATGCTTGGA CAAACCTACA
AGCGGCAGTT ATAACCTTGA CGGCATTGAT ATAGTATCTA AATCACTGCC TGATTTAGCC
GCAATAAGAA ACCAAAAAAT CGGGTTCGTT TTCCAGGGGT TTAATCTTCT TTCCAGAACA
ACAGCTCTTG AAAATGTTGA ATTGCCTATG ATTTATAATA AAATCCCCCC CGCGCAAATG
CGAGAACGGG CCATGCAGGC GCTTGTAAAA GTAGGTCTCG CAAACCGTGC TGACCATGTA
CCCAGCCAAC TTTCGGGAGG ACAGCAGCAG CGTGTAGCCA TAGCAAGAGC TTTGGTTAAC
GACGCTCCCA TAATATTTGC TGATGAGCCT ACAGGCAACC TGGATACCAA AACCAGCCAT
GAGGTTATGA CCCTTTTCAG CCAACTAAAC AGCGAGTTTA AAAAAACAGT TATCGTAATA
ACCCATGAAA ACGATATCGC CGCCTACGCA AAAAGAGTAG TACGTTTTTT AGACGGCAAA
ATTGTTGAAG ACCATGTTCA AACTCCCAGA ACTCCGGAGG GCATATAA
 
Protein sequence
MSLIKFKNLT KVYTLGEIQV HALNDVSLTI ESGEFVAIMG PSGSGKSTCM NILGCLDKPT 
SGSYNLDGID IVSKSLPDLA AIRNQKIGFV FQGFNLLSRT TALENVELPM IYNKIPPAQM
RERAMQALVK VGLANRADHV PSQLSGGQQQ RVAIARALVN DAPIIFADEP TGNLDTKTSH
EVMTLFSQLN SEFKKTVIVI THENDIAAYA KRVVRFLDGK IVEDHVQTPR TPEGI