Gene Emin_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1115 
Symbol 
ID6263615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1215758 
End bp1216990 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content41% 
IMG OID642611595 
ProductRNA modification protein 
Protein accessionYP_001876004 
Protein GI187251522 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG TTTTTATCCA AACTTTCGGC TGTCAAATGA ATATCGCGGA TTCCGCGGAA 
ATGCTTGCCC ACCTTAGTCG CAGAGGGGTT GAGGAAACAA AGGACATAGA ATCTGCCGAT
ATTGTTTTGG TAAACACATG TACTATACGT GAACACGCGG AGCATAAGGC GGTTTCTTTT
TTAGGCAGGC TTGCCAAGTG GAAAGCTAAA GATTGTTCCC GCGTTATTAT TTTTGCGGGT
TGTGCGGCTG AGCGTCTGGG TGAGGCCCTA AAAAAAGATT ACCCTTTTTT AGATATTGTG
GCGGGTGCTA AAGGTATTGA TAATTTTTCC AAAATGCTTG ATGAGAGCGG CCTTTTTGCT
GTAAACGCGC AAAATTACAC GCAAAGCGTT AAAAGCGGAG TGCTTGATTA CGTTACTATA
ATGAGGGGTT GCAATTTTGC ATGTTCTTAT TGCATAGTGC CCAGCGTAAG AGGGGGCGTT
AAATGCCTTT CGCCTGAAGT TATTTTGGAA AACTGCGCCG AGCTGGCCAA AAAAAATGTT
AAAGAAATAG TACTTTTGGG CCAGACTGTT AATGCTTATA AATATGAAGA TACCGATTTT
GCAGATTTGC TTTTAAAGGC AGCTTCGGTA AAAGGCGTGG AAAGGGTAAG GTTTATGAGC
CCGCATCCCG CTTTTATAAC CCCGAAACTT ATTGACACTA TCGCAAAAAA TGATAAGATA
GCAAAACACA TACATCTGCC CGTTCAAAGC GGGTCTGACA AAATTTTAAA GGAAATGAAA
CGCGGTTATG ACAGCAAAAC CGTTATCGAA AAAATAAGCA GGTTAAAGGA AAACGGTGTT
TTGGTTTCAA CCGATATTAT AGTGGGCTAC CCTACGGAAA CGGAAGAGGA TTTTGAAAGA
ACCCTTGAGT TGGTTGATAA ATGCGCTTTT AGTTTTGCGT ACTGTTTTAA ATTTTCGCCC
CGTAGGAACA CTCCTGCCTA CTCGCTTAAA CCTTTAGCAA GTGATAAAGA AGTGGAAAAA
AGGTTGGATA TTTTGTTAAA TAAAGTTAGG CATTTTTCAG CCAAGGCGTA TAAGGACGCC
GCGGGCACTG AGCAAATGGT TTTAATGGAA ACGGTTTATA AAGGACGTAC TTCCGGCAAT
TTATGGGTAA AAACGCCTAA GCAGCACCCT GTAGGAAGTA TGGTGAGAGT AAGAATAAAA
GAAAGTGACG GTAAAATATT ATCAGCGGAG TAA
 
Protein sequence
MKRVFIQTFG CQMNIADSAE MLAHLSRRGV EETKDIESAD IVLVNTCTIR EHAEHKAVSF 
LGRLAKWKAK DCSRVIIFAG CAAERLGEAL KKDYPFLDIV AGAKGIDNFS KMLDESGLFA
VNAQNYTQSV KSGVLDYVTI MRGCNFACSY CIVPSVRGGV KCLSPEVILE NCAELAKKNV
KEIVLLGQTV NAYKYEDTDF ADLLLKAASV KGVERVRFMS PHPAFITPKL IDTIAKNDKI
AKHIHLPVQS GSDKILKEMK RGYDSKTVIE KISRLKENGV LVSTDIIVGY PTETEEDFER
TLELVDKCAF SFAYCFKFSP RRNTPAYSLK PLASDKEVEK RLDILLNKVR HFSAKAYKDA
AGTEQMVLME TVYKGRTSGN LWVKTPKQHP VGSMVRVRIK ESDGKILSAE