Gene Emin_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1020 
Symbol 
ID6263035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1110702 
End bp1111307 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content39% 
IMG OID642611500 
ProductLexA family transcriptional regulator 
Protein accessionYP_001875910 
Protein GI187251428 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC ATAAAAACCA ACAAAAACTT TTACTTTTAC TGCAAAAACA TATAGCGGAA 
CCGCTTTCTA TGGAAGAGCT TGCGGAGGAA ATGGATATAT CAAGCAAAAG CGTGGTTCAC
CATCACATAA AACAGCTTGA AAAAAAAGGT TATTTAATAA GAAACACAAC CAATCCCCAC
TATTACCAAA TTAAAAACCC TGAGGAAAAG GTTGTCTATC TTCCCATGTA CGGCATGGCA
AAATGCGGGC CGGAAGGCAC TATTTTAGAC GGCACGCCTA CACGCATTGT ACCTGTTGAC
CCGGGTATGG TGCAATTTCC CATTAAAAAA GGTTTTATGG TTGAAGCAAA AGGCTCCTCT
ATGGAGGATT TAATTCACGC TAAGGACTGG CTTATTGTTG AACAGTCTAA CACACCAAAG
GTCAATGATA TCGTTGTCTG CGTTAATAAT GAGGAAACAA TGGTAAAAAG ATTTTGCACC
GAAGGAGACA GCATTATTTT AATTTCGGAC AACCGTAAAT TTATTCCCAT AATAGCGGAT
AAAGGCTCTT TTAAAGTTGA GGGCATTGTA AGAAGCGTTA TTAAAAGAGG AATAGGCGAA
GCGTAA
 
Protein sequence
MKLHKNQQKL LLLLQKHIAE PLSMEELAEE MDISSKSVVH HHIKQLEKKG YLIRNTTNPH 
YYQIKNPEEK VVYLPMYGMA KCGPEGTILD GTPTRIVPVD PGMVQFPIKK GFMVEAKGSS
MEDLIHAKDW LIVEQSNTPK VNDIVVCVNN EETMVKRFCT EGDSIILISD NRKFIPIIAD
KGSFKVEGIV RSVIKRGIGE A