| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0926 |
|---|
| Symbol | |
|---|
| ID | 6262639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 1026685 |
|---|
| End bp | 1027200 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642611405 |
|---|
| Product | Tfp pilus assembly protein major pilin PilA-like protein |
|---|
| Protein accession | YP_001875816 |
|---|
| Protein GI | 187251334 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000619994 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 8.71814e-18 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GGTTTACATT AATTGAATTA TTGGTAGTGG TATTAATAAT CGGAATACTC
GCCGCAATAG CATTGCCACA GTATAACAAG GCTGTGGAAA AATCGCGCGC GGTGGAAATG
CTTAGCAATT TAAGCTCGCT CAAAAAATCC GTGGATATCT TTTTTATGGA AGGCGGCGAC
ATAGACCATT TGGACATTGA AAGTTTATCT ATTGAAATAC CCGGCGCTAA AATATCCGGA
AGCACAGGTT TAAATAAAAT AGAGACAAGA AATTTTATAT ACAGAGTGGG CAGAGCTTCC
GACAGCACAG GATCGCCGAT TGTAACCGCT ACAAGGGTTA GAAACTCAAA CACCCTTTAC
CTTGCAATGC AGTTAACCCC GCCAACACAT TCCTGCCATA ATACCTGTTG CTGGTACACA
GCTGCAAATG AATCTTTATG CAAAGCTATC GGCTTTACCG AGACGGCAGC CCAAAGTTGC
AGTATAACAT CTTTAGGATG CAGTAAATAT AAATAA
|
|---|
| Protein sequence | MKKGFTLIEL LVVVLIIGIL AAIALPQYNK AVEKSRAVEM LSNLSSLKKS VDIFFMEGGD
IDHLDIESLS IEIPGAKISG STGLNKIETR NFIYRVGRAS DSTGSPIVTA TRVRNSNTLY
LAMQLTPPTH SCHNTCCWYT AANESLCKAI GFTETAAQSC SITSLGCSKY K
|
|---|
| |