| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0907 |
|---|
| Symbol | |
|---|
| ID | 6262609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 1004856 |
|---|
| End bp | 1006148 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642611388 |
|---|
| Product | aromatic hydrocarbon degradation membrane protein |
|---|
| Protein accession | YP_001875799 |
|---|
| Protein GI | 187251317 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000000931505 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA GTAATATGTT TAAGTTGTTA AAAGCAGTAT TTGTAATATG CCCGTTTGTT
TTTGCCAGCA TGGCGGATTC AGCGGGTTTT GCTCTTTATG AGTTTAGCGC AAGAGGCAAT
GCCATGGGCG GCGCGGTTAT GGCCAACAAG GCGGAGCCCG CTTCAATAGC CACTAATCCT
GCGCTTATCA CCCAGCTTGA AGGCACACAG CTTCAAACAG GCATAACGGC AGTTATTGTA
TCCGGTTCCA CAACCATAGG AACCGAAAAA AGAGATTTGG AAACAGGCGC ATTCTACCTT
CCCGCTTTCT TTCTTACTCA ACAGTTAAGG GAAGATGTTT TTTTCGGTTT AGGTTTTTTT
CCGAGATATG GCCTTGGCGG CAGATATAAA GATTATGAAA CATGGTCAAT GGGCACCGTT
TTAAGGGAAG CTTATACGGT AGACTTAATG ACTTATTCCT TTAACCCCAA TTTAGCGGTT
AAAGTAACGG ATGACTTGTC TTTCGCTATG GGTCTTGAGG TTATGTTTCT TGATTTTCAG
GAAAGGAAAC ACCTTGTCGG CGGCGCAAAA ATGGATATTT CCGGTAATTC CACGACATGG
GGCGGAAATT TTGGCGTTTT GTATAACCCC GGCTGGGCCG AAAAATGGGC TGCGGCTTTA
ACTTACAGAA CAAAAACAAG GCACGTAGCC ACCGGCAGGG TAAAAACCCC AGGCTTGGCG
CTTCCTCCCG CTATATCTTT TGACGGTAAC GCCTCCGCCG CACTTACGCT GCCTGACCAG
TTGGCCTTCG GTTTGTCTTT TACTCCTACA AATAAACTTA CCATGGAAGC CAACATTATG
GGCATTTTTT GGAGTTCTTA CAGCCAATTA AAAATTGATT ATGACGACCT TAGCCAGTCG
CCGGGCGGGC CGGGTAATCC TCCGTATTTA AACGAAAACA AAAATTATAA AGATGTTTTC
CGCATAGGTT TTGGCGTTGA ATACTCTTTA AATCCCACAT GGGATTTAAG GGCGGGTTAT
GTTTTCGATA AGTCCCCTAT TAATAAAAAG TATATGGATA CTCTTGTTCC TGCAGATGAC
AGAAATATCT TCAGCGTCGG CGCGGGGTAT AACGTATCTG AAAGAATGGG TATAGACGTT
TCTTATTCAT ATGTTTTAAT AAGCGACCTT TCCGGCAGAA ACGTGGAAAA AGGAAATACA
GTGTTTAAGT ATGAAGACGC TTCAAGCCAC ATGATAGGCT TATCCTTTAA ATACGCTTTT
GGAAACGGCC CCTTAAGTAA CAGAGTTATA TAA
|
|---|
| Protein sequence | MIKSNMFKLL KAVFVICPFV FASMADSAGF ALYEFSARGN AMGGAVMANK AEPASIATNP
ALITQLEGTQ LQTGITAVIV SGSTTIGTEK RDLETGAFYL PAFFLTQQLR EDVFFGLGFF
PRYGLGGRYK DYETWSMGTV LREAYTVDLM TYSFNPNLAV KVTDDLSFAM GLEVMFLDFQ
ERKHLVGGAK MDISGNSTTW GGNFGVLYNP GWAEKWAAAL TYRTKTRHVA TGRVKTPGLA
LPPAISFDGN ASAALTLPDQ LAFGLSFTPT NKLTMEANIM GIFWSSYSQL KIDYDDLSQS
PGGPGNPPYL NENKNYKDVF RIGFGVEYSL NPTWDLRAGY VFDKSPINKK YMDTLVPADD
RNIFSVGAGY NVSERMGIDV SYSYVLISDL SGRNVEKGNT VFKYEDASSH MIGLSFKYAF
GNGPLSNRVI
|
|---|
| |