Gene Emin_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0906 
Symbol 
ID6262636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1004054 
End bp1004584 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content40% 
IMG OID642611387 
Productpeptide deformylase 
Protein accessionYP_001875798 
Protein GI187251316 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000000931901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTCA GAAGAATAGT TAAATACGGC GAAGATATTT TAAGGCAAAA ACTAAAACCT 
GTTGATTTTA AGACTTTAGA ACCGCAGCTT GACGCCATTT TGCAAGATAT GCACGATACC
TGCATGTCTT TCCAAGGGGC GGGGCTTTCA GCCAACCAAA TAGGGCTTAC GCACCGCATA
GCCATGATTT TCATACCCGA AAAAACCCCA AAAGGCGAGG CTCAAAAATT TAAAAGATAT
GTTGTAATTA ACCCTGTTAT AGTATCAAAA AAAGGCTGCG TTACCGATGA GGAAGGGTGC
CTTTCACTTC CCGGCTTATG GGTGGAAATT GAAAGGGCCG AAAGTATTGT TGTACACTGT
TTAAACGAAA AAGGGCTTCC CGTAGAAATA CACGCCAAAG GTTTTTTAGC AAAAGCCTTG
CAGCATGAAA TTGACCATTT AGACGGCAAA ATATTTATTG ACCACGCCGA CCCGAAATTA
AAACCTGAAA TTAAAAAAGA ACTTAAAAAA CTTTCAAAAA ACTGGTCATA A
 
Protein sequence
MAVRRIVKYG EDILRQKLKP VDFKTLEPQL DAILQDMHDT CMSFQGAGLS ANQIGLTHRI 
AMIFIPEKTP KGEAQKFKRY VVINPVIVSK KGCVTDEEGC LSLPGLWVEI ERAESIVVHC
LNEKGLPVEI HAKGFLAKAL QHEIDHLDGK IFIDHADPKL KPEIKKELKK LSKNWS