Gene Emin_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0882 
Symbol 
ID6262679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp971833 
End bp973221 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content42% 
IMG OID642611361 
Productmajor facilitator transporter 
Protein accessionYP_001875774 
Protein GI187251292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000105455 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000000451696 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGG CAAAATTTTT AAGTAAAAAT AAACTTTTAA TTTTAGCCAT ATCGGTAGCT 
TCTTTTATGG TTAATTTAGA CACGTATATT ATAAACGTGT CGCTCCCTTC GATAGCGGGC
GGGTTTAACG CTTCCACCGC GGATATTTCG TGGGTGGCAA TGGCTTATAA CCTGACGGTT
GTTTCATTAC TTCTTATATT CGGCAAACTG GGCGATAAAG TAGGTTTGAA ATTTTTATTT
ATAACAGGCT TTATTATATT TACTTTAAGC TCTATACTTT GCGGCTTTGC CCCCTCGTTG
CCATTTTTGG TAGCCGGCAG GCTTTTGCAA GGTATAGGCG CTTCAATACT ATATGCTTTG
CCGCAAGCCA TGATACCCAA ATACCTGCCA AAAGAAGAAC GCGGCATGGC ATTTGGCATA
CTGGCAAGCG CTGCCGCTTT AGGTATAACC CTGGGCGCGC CGCTAAGCGG CATTATAACG
GGGCTTTATT CATGGAGATG GATATTTTTT ATAAACCTGC CCGTAGGAAT ACTTGCCGTT
ATTGTTTTAA ACTATTCAAT ACCTTCTAAA AACACAATAA CTAAGCGCGA ACCCCACTTT
GACATCCCCG GCGCAGTTTT AAGTTTTTTA ATGGCACTGG CATTTACTTT TTGGATAAAC
AGAGGCGGCA TTTACGGCTG GACCGCACCT AAAATGCTTT TATGTTTAGC GTTTGCGGTA
ATTACGTTTG GAATATTTAT AAAGAGGGAA AAAAAGGCAA AATACCCTCT TTTAGATTTA
AGCCTTTTTA ATAATATAAC TTTTAATTTC GCCAACATAG CAATGTTTTT AGTATCGGCT
TTTTTGGCGG GCACAAATTT TCTTATGCCT TTTTATCTGG CTGAAATTAA AGGCCTTTCC
CCCGCGCGGA CTGGAGCGGC GTTTATGGTT TATTCCGTGT CATATATGCT TACGGGGCTG
GTATCTGGCA AACTGTCAGC CAAAATACCG GCCGGGAAAC TTTGCGCGTG GTCAATGCTG
CTGGCGTCTG TTACTTTGGC GGGGCTTGTT TATATGTTAA ATACAAGCGG TATATATTAC
ATAATTTTAT ACTTTACGCT AACGGGCGTG TCTTTTGCTT TCTTTATAAC GTCAAATAAT
AATTTTGTAA TGTCAATGGC GCCGGAGAAT AAAGAAGGCA TGGTGTCCGG CGCGCACCGT
ATGGTAGGGC GCATGGGCAT GCTTTGCGGC GTTGCGCTGT TTGAGGCGGT GTTTTCTTTT
TACGGCTCCG AAAACCTTAT AAACGGGTTT AGAGGAGCAT ACGCCCTTGG CGCGGCAATG
TGTTTTGCCG CTATGCTTTT TTCATTAAAA AAACCAGTGT TAAAATTAAA TAAAGGAGAC
GTAATATGA
 
Protein sequence
MSAAKFLSKN KLLILAISVA SFMVNLDTYI INVSLPSIAG GFNASTADIS WVAMAYNLTV 
VSLLLIFGKL GDKVGLKFLF ITGFIIFTLS SILCGFAPSL PFLVAGRLLQ GIGASILYAL
PQAMIPKYLP KEERGMAFGI LASAAALGIT LGAPLSGIIT GLYSWRWIFF INLPVGILAV
IVLNYSIPSK NTITKREPHF DIPGAVLSFL MALAFTFWIN RGGIYGWTAP KMLLCLAFAV
ITFGIFIKRE KKAKYPLLDL SLFNNITFNF ANIAMFLVSA FLAGTNFLMP FYLAEIKGLS
PARTGAAFMV YSVSYMLTGL VSGKLSAKIP AGKLCAWSML LASVTLAGLV YMLNTSGIYY
IILYFTLTGV SFAFFITSNN NFVMSMAPEN KEGMVSGAHR MVGRMGMLCG VALFEAVFSF
YGSENLINGF RGAYALGAAM CFAAMLFSLK KPVLKLNKGD VI