Gene Emin_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0807 
Symbol 
ID6262805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp884217 
End bp884765 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID642611285 
Producthypothetical protein 
Protein accessionYP_001875699 
Protein GI187251217 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000505152 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAAC ATTTAAATAA TAAAAAAGCT TTTACTTTAA TTGAACTTCT TGTTGTTGTG 
CTTATAATAG GTATTTTGGC TGCTATAGCC TTGCCACAAT ATAATAAAGC CGTGGCAAAA
AGCAGAATGT CACAGCTTAT ACTTATGAAT AAAGCTCTTA CGGACGCCCA GGAAAGGGTT
TTTCTTGCTA TGGGCAGATA CGCTACCAGC GTTGACGAAC TTGATATAGA TGTTACCGCC
GGGTTTACTT TGTGCGCTTC CGACGCGCGA GGACAATACT ATACAAACGG TAAACACCAG
ATAATATTAA AGGAAAACGT TTGGGGAATG GGAGAAATTA CTGCTAACTC AAATTGCGCT
ATAACAATGA GAGGGCTTAC GGTTATGGCT TACCCTCCCG GTACAGAGAC TTGCTCTTCT
ACAGAAAAAT CCCCGTGTAT ATACTGCGTG CAGCTTTCCA CAACTCCCGC TGGTTTATGT
GTGGCTGTAG GAGCGCAAAA AACATCACAA ACAAACTCCT CCGGTTCAAA AATGCACAGG
CTGAATTAA
 
Protein sequence
MRKHLNNKKA FTLIELLVVV LIIGILAAIA LPQYNKAVAK SRMSQLILMN KALTDAQERV 
FLAMGRYATS VDELDIDVTA GFTLCASDAR GQYYTNGKHQ IILKENVWGM GEITANSNCA
ITMRGLTVMA YPPGTETCSS TEKSPCIYCV QLSTTPAGLC VAVGAQKTSQ TNSSGSKMHR
LN