| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0788 |
|---|
| Symbol | |
|---|
| ID | 6263402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 865965 |
|---|
| End bp | 866204 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642611265 |
|---|
| Product | putative pilus assembly protein major pilin PilA |
|---|
| Protein accession | YP_001875680 |
|---|
| Protein GI | 187251198 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0173637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG CATTTACCCT AATAGAACTT TTAGTGGTTG TTTTAATTAT CGGTATACTT
GCGGCAATAG CTTTGCCGCA GTATAATAAA ACTGTTGAAA AATCGCGCGC TTCCGAAGCA
TTTTTAATAG TTAAAGCCAT TTCAGGCGCG GTTGACAGAT ATCTTTTAGC CACAGGCGTG
CCAACTAATG ACTTTGACAG TCTTGATATT GAAATACCCG GCACGAAAGC TCGCGGTTAA
|
|---|
| Protein sequence | MNKAFTLIEL LVVVLIIGIL AAIALPQYNK TVEKSRASEA FLIVKAISGA VDRYLLATGV
PTNDFDSLDI EIPGTKARG
|
|---|
| |