Gene Emin_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0702 
Symbol 
ID6263940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp777131 
End bp778621 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content37% 
IMG OID642611174 
ProductD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 
Protein accessionYP_001875594 
Protein GI187251112 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000579127 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAACAA CTTTCCTTAC ATTTATTATA CTTTGTTTTA GTTTAACCTT GCACGGAGCG 
GAAATAAAAG TGCCTCTACA ATCCGAGGCG CTTAAAAATA CTTCATATTC TTTTTACGCA
AAATATGTAG ACGGTGAAGA TATTTTGACA ATAAACCCCG AACTGCGCCT TACCCCCGGC
AGTCTGATAA AACTGTTTAC TACCGCCGCC GCGATTGAAT ATATGGGGCC CGAACATAAA
TTTAAGACGG AAATTTATTT TGACGGCAAA AAAAATATTT TTGGTACTTT AAAGGGTAAT
GTTTACATAA AAGGCGGAGG GGACCCGTCG CTAGGCTCTA ACAGAATTAA AACAAACCCT
TCTATGGAAG AAATTTTGGA TTTTTGGGCT TCGCGCATAG AAAGCCAGGA GATTAAAAAA
ATTGATGGAG ATATAATTGC AGATGTTTCT CTTTTTTCCG GCAATAATCT TCCTCCTAAA
ACAGCTTGGG AAGATATGGG CAACTATTTT GGCGCCACTT CCGAAGCGCT TAATTTTAAT
GATAATATGT TTACGCTACG TTTTAAACCC CAGCCGCAGA AACTTAGTTT AGTTGAATTT
GATTCCATGT CTCCGCAGGT TGAAAGAATA AGCGTAAAAA GCTATGTTGT GACAGACCCG
TTTTCATCAA GCGACGAGAT TTATATTTTT GCCGCTCCCG GGCAATTTGA GCTTATTGCC
AGAGGAACAG TACCGATAAA AACAACAGCG AGTTATGTTT ATGCATCGCT GCCTGATCCG
CCTTTATTTA CAGCCCAGCA ATTTAAAAAC GAACTTTTAA AAAGAGGAAT TAAAATCACA
GGCCGAGCAA GGGTAAGCTA TGGCAACTTT AATTACACAG ACAAAACGCT TCTTGCCTCC
TCGTATTCAC CCGCGCTTTT TGAAATAATT AATATTATAA ATAAAAAAAG TTTTAATCTT
TATTCCGAGG TTTTATTAAA AAACATCGCC GTTTTTAATA CAGGCATAGG AAGCACGGAA
CAGGGGATTA TAGAAGTTGA AAACTTTTTA CGCGCGCAAA ACAATCTTAC GGATAATTTT
AAAATATACG ACGGCAGTGG CCTGTCAAGA AATAGTTTTG TAAACACCAA AACCGTGATT
ACGTTTCTTG AAAACATGAC AAAAAAACCA TATTTTGAGA TTTTTTATAA CTCTCTTCTG
ACTCCAGCGG GAGAAGAAAA ACACCGTCTT AAAAACGCGT TTTCCAATTC ACCGGCGTTT
GATCTTCATA TGAAAACAGG GTTTTTAACG GGTGTACGCT CTTACAGCGG TTATATTAAA
GATTGTAATG GTAAAATGAT AACATTCTCT TTTATTGTAA ATAACTATAC GGTTACAACA
AATGAAATAA ATAAAATATT TGAGGATATT TTATCCTCTC TTTCAAATAT CGGGCGGCCG
CCGCCCGCAA CTAAAAAAGC TGCCGGAAAT ATAAAAAAAC AGACCTCTTA A
 
Protein sequence
MRTTFLTFII LCFSLTLHGA EIKVPLQSEA LKNTSYSFYA KYVDGEDILT INPELRLTPG 
SLIKLFTTAA AIEYMGPEHK FKTEIYFDGK KNIFGTLKGN VYIKGGGDPS LGSNRIKTNP
SMEEILDFWA SRIESQEIKK IDGDIIADVS LFSGNNLPPK TAWEDMGNYF GATSEALNFN
DNMFTLRFKP QPQKLSLVEF DSMSPQVERI SVKSYVVTDP FSSSDEIYIF AAPGQFELIA
RGTVPIKTTA SYVYASLPDP PLFTAQQFKN ELLKRGIKIT GRARVSYGNF NYTDKTLLAS
SYSPALFEII NIINKKSFNL YSEVLLKNIA VFNTGIGSTE QGIIEVENFL RAQNNLTDNF
KIYDGSGLSR NSFVNTKTVI TFLENMTKKP YFEIFYNSLL TPAGEEKHRL KNAFSNSPAF
DLHMKTGFLT GVRSYSGYIK DCNGKMITFS FIVNNYTVTT NEINKIFEDI LSSLSNIGRP
PPATKKAAGN IKKQTS