Gene Emin_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0682 
Symbol 
ID6263957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp756070 
End bp756567 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content39% 
IMG OID642611153 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875574 
Protein GI187251092 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0723462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000174273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAACA AATTGTTTAA AAAAAATTCC TTTGGGTTTA CCCTTATTGA ACTTTTAGTT 
GTTGTGCTTA TAATAGGCAT TCTTGCCGCC ATTGCCGTGC CGCAATACCA AAAAGCTGTT
TTTAAAAGCA GGTTCGCTAC TTTATATGCG GCCGTAAACG CTATCGCACA AGCTGAAGAA
ATTTATTATA TGGAAACCGG CACATATACG CAAGATAAAG ATGCGTTGGT AATTAATATG
GATGAAAGCT CCAAAGATCT TGTTAATATA TGGAATAATC CTTCAACGGA TAATTGGGCA
GTGCACGCTT CGTTAGATTC AGGAACGCTT ACATACTTGG TTTGGCCCGC TAATTCCAAG
GTAAGAAACA GCGCGCGGCT TTGCCGGGCA TATTTAAATA AACCTAATAC AGAGTTGGCA
AAGTCAGTTT GCGTGTCTTT AATGGATAAA AGCACCACTG TAGTAAAGGC AGCAGAATAT
TGGGAATATT TTTTATAA
 
Protein sequence
MQNKLFKKNS FGFTLIELLV VVLIIGILAA IAVPQYQKAV FKSRFATLYA AVNAIAQAEE 
IYYMETGTYT QDKDALVINM DESSKDLVNI WNNPSTDNWA VHASLDSGTL TYLVWPANSK
VRNSARLCRA YLNKPNTELA KSVCVSLMDK STTVVKAAEY WEYFL