Gene Emin_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0625 
Symbol 
ID6263761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp683128 
End bp683928 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content35% 
IMG OID642611096 
Productpolysaccharide deacetylase 
Protein accessionYP_001875517 
Protein GI187251035 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0292231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAT ACGCTTATAT TTTAATTTTT ATAACCGCCT CCGCATTTTG CTATACGCTG 
CGTTTTAAAT GGTGGGAAAA GAAAAAAACG GGCCTTCTTG TTTTAAGCTA CCATAATATA
GGCAAACCTC CTAAAAAATC AAAATTTAAA CAAAACTGGA CAGAAAAAGA AGTTTTTGAA
AAACAGCTTG ATTATATTTT ATCGCAAGGC TATACTACGC TTACGTTTGA CGATTTGAAT
GAAATACAAA ACGGCGCAGC ACAAATGCCT TCAAAACCGC TGTTAATAAC CTTTAATGAC
GGCCTTAAAA ACAATTGCCT GCTTCTTGAT ATTCTTAAAC AAAAAAAAGC TAAAGCGAAT
ATATTTTTTG TTTTTGACGC TATTGATAAA TACAACTTAT GGCAAAACTC GTCCAAAGAA
TTATGGCAAG ATATGCTTAC CTCCACGCAA ATAAAAGAAC TTTTAGAATC AGGTTTAGTA
GGGTTTGGGT CACACTCGTT ATCGCATAAG AATTTAAAAA ACGCTTCCTA CGAAGAAGCT
GAACATGAAA TAAAAGAAAG CAAGTTCAGG TTTGAGCAAA AGTTCGGCAA AGAAATTTAC
GCCTTTCTCC CCCCCGGCGA AACACAGCCA AGCGCGCGCA CGCGGGAACT TGTTTTTAAA
TCAGGCTACA AATTTTTATT TTGCGGAGTT CCGGGCATTA ATGAACTGCC GCTTAATACA
GAAGCTCCTA TAAAAAGAAT AACTATTGAA AGAAAACATT ATTTTGCCTG GGTTAAAGCA
AAATTAAACA AAGCTTTTTA A
 
Protein sequence
MPIYAYILIF ITASAFCYTL RFKWWEKKKT GLLVLSYHNI GKPPKKSKFK QNWTEKEVFE 
KQLDYILSQG YTTLTFDDLN EIQNGAAQMP SKPLLITFND GLKNNCLLLD ILKQKKAKAN
IFFVFDAIDK YNLWQNSSKE LWQDMLTSTQ IKELLESGLV GFGSHSLSHK NLKNASYEEA
EHEIKESKFR FEQKFGKEIY AFLPPGETQP SARTRELVFK SGYKFLFCGV PGINELPLNT
EAPIKRITIE RKHYFAWVKA KLNKAF