Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0625 |
Symbol | |
ID | 6263761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 683128 |
End bp | 683928 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642611096 |
Product | polysaccharide deacetylase |
Protein accession | YP_001875517 |
Protein GI | 187251035 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0292231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAATAT ACGCTTATAT TTTAATTTTT ATAACCGCCT CCGCATTTTG CTATACGCTG CGTTTTAAAT GGTGGGAAAA GAAAAAAACG GGCCTTCTTG TTTTAAGCTA CCATAATATA GGCAAACCTC CTAAAAAATC AAAATTTAAA CAAAACTGGA CAGAAAAAGA AGTTTTTGAA AAACAGCTTG ATTATATTTT ATCGCAAGGC TATACTACGC TTACGTTTGA CGATTTGAAT GAAATACAAA ACGGCGCAGC ACAAATGCCT TCAAAACCGC TGTTAATAAC CTTTAATGAC GGCCTTAAAA ACAATTGCCT GCTTCTTGAT ATTCTTAAAC AAAAAAAAGC TAAAGCGAAT ATATTTTTTG TTTTTGACGC TATTGATAAA TACAACTTAT GGCAAAACTC GTCCAAAGAA TTATGGCAAG ATATGCTTAC CTCCACGCAA ATAAAAGAAC TTTTAGAATC AGGTTTAGTA GGGTTTGGGT CACACTCGTT ATCGCATAAG AATTTAAAAA ACGCTTCCTA CGAAGAAGCT GAACATGAAA TAAAAGAAAG CAAGTTCAGG TTTGAGCAAA AGTTCGGCAA AGAAATTTAC GCCTTTCTCC CCCCCGGCGA AACACAGCCA AGCGCGCGCA CGCGGGAACT TGTTTTTAAA TCAGGCTACA AATTTTTATT TTGCGGAGTT CCGGGCATTA ATGAACTGCC GCTTAATACA GAAGCTCCTA TAAAAAGAAT AACTATTGAA AGAAAACATT ATTTTGCCTG GGTTAAAGCA AAATTAAACA AAGCTTTTTA A
|
Protein sequence | MPIYAYILIF ITASAFCYTL RFKWWEKKKT GLLVLSYHNI GKPPKKSKFK QNWTEKEVFE KQLDYILSQG YTTLTFDDLN EIQNGAAQMP SKPLLITFND GLKNNCLLLD ILKQKKAKAN IFFVFDAIDK YNLWQNSSKE LWQDMLTSTQ IKELLESGLV GFGSHSLSHK NLKNASYEEA EHEIKESKFR FEQKFGKEIY AFLPPGETQP SARTRELVFK SGYKFLFCGV PGINELPLNT EAPIKRITIE RKHYFAWVKA KLNKAF
|
| |