Gene Emin_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0571 
Symbol 
ID6262813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp622828 
End bp623319 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID642611042 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875463 
Protein GI187250981 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTTACTTT AATAGAACTT TTAGTGGTAG TCTTAATTAT AGGCATACTT 
GCCGCCATAG CGTTGCCGCA ATATACAAAC GCCGTGGAAA AATCCCGTAT GTCCGAAGCG
TTAATAGTAG GCAAAAATTT TGTTGACGCA AGCCAAAGAT ATTTCCTCCA AACGGGCGAA
TACCCTACAT CTTTTGATGA ACTTGACATT GAAGTTCCGG GCGGATATAC AATAAACGGC
GCCTGGGCCA CAAGTAACAA CTTTACAATG CAGCTTGACG GTAAAAATGC CATTGTTCCC
GCTATAAGAA TTTTCCGCCT TAACAGCGCG GGAGAGAAAG TTGATTATTA TATTTGGTGG
GATATGACTA AAAATTCCAG AACATGCAAC ATACACGCGG GTATAATAAA CACTTTTAGC
GATAAAGGTA AAAAACTTTG CCTTTCCGCC GGGGGAAAAG ATTCCGGCAC AAGCGGCGTT
TGGAATTTTT AA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTN AVEKSRMSEA LIVGKNFVDA SQRYFLQTGE 
YPTSFDELDI EVPGGYTING AWATSNNFTM QLDGKNAIVP AIRIFRLNSA GEKVDYYIWW
DMTKNSRTCN IHAGIINTFS DKGKKLCLSA GGKDSGTSGV WNF