Gene Emin_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0557 
Symbol 
ID6262768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp609164 
End bp610246 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content39% 
IMG OID642611028 
Productputative transcriptional regulator 
Protein accessionYP_001875449 
Protein GI187250967 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTA ATAAACCTAT TCACGAAATA ACTTTTGAAG ACGTAGTTAA ATTTTGCGAG 
AAAATGGTTC CCGAGGGAAA ACAACTCGAC TATAAATATT TCCTTCCTAA AAATAATGAA
AAATTCGCAA AAAGTATAGC TTCTTTTGCC AATGCTATGG GCGGAACTAT TATTATAGGC
GTTAAAGACG ATAAAAATGA TTCGCCCACG CCGCCTTTTA CCGGAATTCC TTTTCAATAT
AAAATAAGAA ATAAAATTGA AGATATTATT CAGACTTATA TAGACCCGGT TGTATTTGTG
GATATTAATG TTTGTGGCAA TTCGCACGGG CAGATGTTTG TTGTGGTTAA TATACCGCAA
AGTAATTTAA CGCCGCACCT TGTCGGCAAA ATGAAGCGGG CCTATATAAG AACGGGGCAG
AGCTCAAGGC CAGAAATAAT AGTCCACCCC GATAAACTTC CCTGGCTTTT GGACCACCGT
AAAAAATCTG AAGCGTTGCG TCATATATTA TTAGATAAGG CGGGCAAACA TTTTGATAAC
TACATCAAAT CTTTAAGCTT ACGTTCCGAC AGCCAAAAAG CGGTTTTAGC CGTTTCTTTA
ATCCCAATGT ACCCGCAGGA ACCTTTGCTT GATTATCATG ATTTGCGCCC TGTCATGGAA
GGCTTATTCC CGGGAGGGCA AACCAAAACT GTGCAAGACG GTATAACAAA GCTGGGTGAT
AAAGATATAA GCATGCTGGA ACTTAACTCC TACGGGTTAA TATATTTTAA AAAAGTGCTT
GTGCCCAACG CGGATAACGC CGTTTTAAAT TTTGCTGATT TAGAACAAGA TATAAGAGTT
TTTTTTAAAA CGGCGACCAA TTTTAACAGG CATATTGCTT TTGGCGGACC GTTGAGTTTT
AGGTTTACAA TTACCAATGC CCGCGGTGTC GAAGTGTTTT ATAATGATAA ACGCGCCAGC
GTGCTTGAGG ATTTTATAAG AACGGACTGC ATATACACAT CTTCAAAGAT AGAACTTGAT
ATGGATAATA TTTCCGAACA AATACTAAAC AAGACAGCCT GGGCCCTTGA TATAGGCAAA
TAA
 
Protein sequence
MLFNKPIHEI TFEDVVKFCE KMVPEGKQLD YKYFLPKNNE KFAKSIASFA NAMGGTIIIG 
VKDDKNDSPT PPFTGIPFQY KIRNKIEDII QTYIDPVVFV DINVCGNSHG QMFVVVNIPQ
SNLTPHLVGK MKRAYIRTGQ SSRPEIIVHP DKLPWLLDHR KKSEALRHIL LDKAGKHFDN
YIKSLSLRSD SQKAVLAVSL IPMYPQEPLL DYHDLRPVME GLFPGGQTKT VQDGITKLGD
KDISMLELNS YGLIYFKKVL VPNADNAVLN FADLEQDIRV FFKTATNFNR HIAFGGPLSF
RFTITNARGV EVFYNDKRAS VLEDFIRTDC IYTSSKIELD MDNISEQILN KTAWALDIGK