Gene Emin_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0552 
Symbol 
ID6262758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp603846 
End bp605396 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content41% 
IMG OID642611023 
Productlipopolysaccharide heptosyltransferase II 
Protein accessionYP_001875444 
Protein GI187250962 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATG AAAATTCGGA AAAGTCCCCT AAGATTTTAG TTATAAGACT TTCTTCTTTA 
GGCGATATAG TTCTTTCCTC CCCGGTATAC AAAAACCTTA AAGCAAAATG GCCAAACTGC
CATATAACAT TGCTTGTAAA AAAACAATTT GCCGACGTGC TTTCCTGCCA TCCGGATATA
GATGAAATCC TTACCTTAAA GAGAACAAAT TTAGAAACGG TGCATGAAAT TAAAAGCAGG
AACTTTACCC ACTTACTTGA CCTGCACTCC AATTCTAGAA GCATAATAAT AACAGCTTTA
TCCGGCATAC CCAACAAAGT TAAATACAAC AAAAGCTCCG TGGCAAGGCG AATGTTTGTT
AAATACCGCC GCCAAAGCCC CGAACTTGAA AAGCATACTT TGGAAAAATA TCTTGACGCT
TTAACCTCTT GGGACGTACC CATAATTTAT AAAGAACCCC AGCTGGGCGA TTGGTGTTAC
AACACTTCAG ACGGCGCTGC GGATAAAAAG AAAATAAGAA AAATAGGCAT ATTCCAAACT
TCCTTTATAG GTGACAGCGT TTTAACAACG CCGCTTGTAT CCAAAACGGC AAAAATGTTT
CCTGACGCAA AAATAGTTGT TATCACACGC CCGGAAACCG AATCAATTTT TAAACACATG
CCGGAAGTTT CCCAAATTAT TTTAAATGAA AAGAAGGGGC TTAAAAAAAT AACAGGTATT
TTTAAAACAG CCAAAGAAAT TAAACAAAGC GGCATTGATA TACTTTTGGT TCCGCACAGA
AGTTTCAGAA GCGCCTTAAT AGCCTGGTTA AGCAAAGTTC CTATAAGAAT AGGGTTTTCC
TCAAGCGAAG GTTGGTTTTT ATATACCAAA ACCGTGCCTT TCTCATGGAT GATTCACGAC
GCGGAACGCA ACTTAAACCT GCTTCACGGC ATTGTTAAGG AAAATTTTCA GGCCGAGGAA
CTTAACCTTA AATCGGTTCC TACTCCCGCT GAAAATATAG CAAGACTTAT GAAGGAATAC
CACCTTGAAG GCAAAACCCT TATAGGTATT CACCCCGGTT CAGCCTGGGC CACAAAATGC
TGGCCCGAGG AAAAGTTTAC CGAGCTTATA AGCAAACTGC AAAACGAGCT TAGCGTGACC
TGCGTTTTAG TAGGCGGCGC GAAAGACAGC GAACTGGGCG AAAGGATACG CCGCGTATCT
AAAGGCACAA CAGCTAATTT AGCCGGTAAA ACCAGTTTAA CAGACCTCAT GTCTTTAATG
CCTAACTTTA AACTTTTTAT TACAAACGAT TCAGGTCCAA TGCATATAGC AACGGCTTAC
AGCGTTCCCA CGCTTGCCAT ATTCGGCCCC ACAACAAAAG AATTGGGCTT TTTCCCTTAT
GGTAAAGGAC ACAGAGTTAT TGAGGTAAAG GACCTTAAAT GCCGCCCGTG CGCTTTACAC
GGGGGTAAAA GATGCCCTGC CGGCCATTTC AAATGCATGA ATGACATAAG CGTTGATGAA
GTATTTAAAA ACGCAAAAGA AATGCTGCAA GAGCATAAGG TGATAGCTTA A
 
Protein sequence
MNNENSEKSP KILVIRLSSL GDIVLSSPVY KNLKAKWPNC HITLLVKKQF ADVLSCHPDI 
DEILTLKRTN LETVHEIKSR NFTHLLDLHS NSRSIIITAL SGIPNKVKYN KSSVARRMFV
KYRRQSPELE KHTLEKYLDA LTSWDVPIIY KEPQLGDWCY NTSDGAADKK KIRKIGIFQT
SFIGDSVLTT PLVSKTAKMF PDAKIVVITR PETESIFKHM PEVSQIILNE KKGLKKITGI
FKTAKEIKQS GIDILLVPHR SFRSALIAWL SKVPIRIGFS SSEGWFLYTK TVPFSWMIHD
AERNLNLLHG IVKENFQAEE LNLKSVPTPA ENIARLMKEY HLEGKTLIGI HPGSAWATKC
WPEEKFTELI SKLQNELSVT CVLVGGAKDS ELGERIRRVS KGTTANLAGK TSLTDLMSLM
PNFKLFITND SGPMHIATAY SVPTLAIFGP TTKELGFFPY GKGHRVIEVK DLKCRPCALH
GGKRCPAGHF KCMNDISVDE VFKNAKEMLQ EHKVIA