| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0535 |
|---|
| Symbol | |
|---|
| ID | 6262726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 585831 |
|---|
| End bp | 587735 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642611005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001875427 |
|---|
| Protein GI | 187250945 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000025366 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.911782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GGTTCACCTT AATAGAAATA GCTGTGGTAG TTTTAGTAAT AGCTATTTTA
GCGGCTATAG CTTTGCCGCA GTACAGAAAG TCGTTAGAAC GCTCAAGAGC TGCCGAAGCT
TTTGACATCC TTACAGAGAT AAGGAACAAA CAAGAAGCAA GAGACTTGCT TGGCACCGGC
ACCGCCAAAG GCTATACTAT AAAGTTTAGC GATTTGGGGG AAGTAATAGC GGGCAAAACC
TCCACAACAA ACACGTTAGA CACAAAACTT TTTTCATATG TTCTTTCAGA CAACCCCTAC
CCTCAGGCGT ACGCCAAAAG AAAAGATTTA GATTATTCAA TAGTTCAAAC CAAAGGCTAC
CAAGACAGCG CATTGTGTTG TATAGGTAAA GACTGCGATA TGGTAGATAA TGTTTTAAAA
GGGTGTGAGA AGACAGCGTG TCCTACAACA TGCGCGGCTG GATATAAAAG AACAGGGTAC
TTTTTTTCAG AAGACGGGCC TTGCTGTGAA GCCAAAACGT CGTGCCCGAC AACATGTCCT
ACGGGACAAA AAAGAAGCAG CGTGCAGTAT ACGGAAGATG GAGCGTGCTG CGTAGCCAAA
ACATCATGCC CGACAACATG TCCTACAGGC CAGCAGAGGA CAAGCGTACA ATATAGTGAA
GACGGAGCAT GCTGCGTATC AAAAACGTCG TGTCCCGCAA CATGTCCTAC AGGTCAAAAG
AGGACAAGCG TACAATACAG TGAAGACGGA GCATGTTGCA CGGCTAAAAC GGCTTGTCCC
GCATCATGTC CTGCCGGAGA AGAAAGAACA AGCGTGCAAT ACAGTGAAGA CGGAGCGTGT
TGCACAGCTG TAAAATGTGC TGATGATAAT AAAAGTCTTT ACTTAAACTC TTCAAACGGT
TTTTGGTCTG ATACACTTTG TAAAGGTATT TGCTGCGGGG TGGGGTATTA TCCCGTTGAT
AAAGGAACAT ATTTAACTTG TTATAACGGA GTTATGTACG GCAGTGAGGC GGTTTGCGAA
GATAACCCAA TACCTTGCGG CAGCGGGCAA ATACTTGTTG GTGGAGTGTG TAAAACGGCG
TGCCCTTCTA CGTGTCCCAC AGGCCAAAAG AGAACAAGTT CCCAGTATTC TGAAGACGGA
GCGTGCTGCG TGGCTAAAAC AGCGTGTCCC GCCACATGTC CCACGGGCCA GGAAAGAACA
AGCGTGCAAT ACAGTGAAGA CGGAGCGTGC TGCCAAACAA AAGCATGTCC CACAGGACAA
ACCCTTGTTG GGGGAGTATG CAAAACAGCG TGTCCTGCGA CATGTCCTAC GGGCCAGGAA
AGAACATCCA TGCAATACAG TGAAGACGGA GCGTGCTGCC AAACAAAAAC ATGTCCCACA
GGACAAACCC TTGTTGGTGG AGTATGTAAA ACAGCGTGTC CCGCCACATG TCCCACGGGC
CAGGAAAGGA CATCCGCGCA ATACAGTGAA GACGGAGCGT GCTGCAAAGC AAAAACATGT
CCCACAGGGC AAACGCTTGT CGGAACTGTT TGTAAAACCA ATTGCCCGTC AGCCTGTCCG
ACAGGTTATG CAAGAAGTTT GGTTAATTAT ACTGAAGACG GCGCCTGCTG TAAGCCTCAG
GTAGTGGCAT ATAATTGCCA ACCTGTTCCG GGAGCCGGTT TAACTGGCGG ACCCGGTGAC
ATTTGGATAG GAGCCACTAT GGCAAACAAT GGAACAGCTA CTTCAAGTCA TGTTGTTTCA
ACCAGAGTTG ATTACCAAAC AGGCTCCGGT TATTCAGGCT CAGCATATCA GGATATTGTA
ATACCCCAGG GAGCTAAGTA CGGAATTTTG GAATTTTCTG CTTACACGCC TTCAGGAGAC
ACGGGTGTTA CAAATTGTAC AGTTACTGTG ATTTCAGTTA ACTAG
|
|---|
| Protein sequence | MKKGFTLIEI AVVVLVIAIL AAIALPQYRK SLERSRAAEA FDILTEIRNK QEARDLLGTG
TAKGYTIKFS DLGEVIAGKT STTNTLDTKL FSYVLSDNPY PQAYAKRKDL DYSIVQTKGY
QDSALCCIGK DCDMVDNVLK GCEKTACPTT CAAGYKRTGY FFSEDGPCCE AKTSCPTTCP
TGQKRSSVQY TEDGACCVAK TSCPTTCPTG QQRTSVQYSE DGACCVSKTS CPATCPTGQK
RTSVQYSEDG ACCTAKTACP ASCPAGEERT SVQYSEDGAC CTAVKCADDN KSLYLNSSNG
FWSDTLCKGI CCGVGYYPVD KGTYLTCYNG VMYGSEAVCE DNPIPCGSGQ ILVGGVCKTA
CPSTCPTGQK RTSSQYSEDG ACCVAKTACP ATCPTGQERT SVQYSEDGAC CQTKACPTGQ
TLVGGVCKTA CPATCPTGQE RTSMQYSEDG ACCQTKTCPT GQTLVGGVCK TACPATCPTG
QERTSAQYSE DGACCKAKTC PTGQTLVGTV CKTNCPSACP TGYARSLVNY TEDGACCKPQ
VVAYNCQPVP GAGLTGGPGD IWIGATMANN GTATSSHVVS TRVDYQTGSG YSGSAYQDIV
IPQGAKYGIL EFSAYTPSGD TGVTNCTVTV ISVN
|
|---|
| |