Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0495 |
Symbol | |
ID | 6262697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 542791 |
End bp | 543309 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642610965 |
Product | fimbrial protein EcpC precursor |
Protein accession | YP_001875388 |
Protein GI | 187250906 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.014346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG CGTTTACATT GATTGAACTT TTAGTGGTTG TTTTAATAAT AGGAATTTTG GCCGCTATAG CGGTGCCGCA ATATAATAAA GCGGTTTTAA AAAGCCGCGC TACCGAATCT ATGATTATAG TAAACGCTAT TTACGGCGCT TTGGAAAGAT ACAAACTGGC AACGGGCCAA TACCCGTCTA CAATGAGCAA TTTTCCATCG GCGGCGGAAA TTAACGAATA CCTTGACATT GAAATATCTT TGCCAAAAAA CACAGCAATT TTTTATTATC CGCACTCGTA TTTCGGTATT AATTATAATA CCGCCTCGGT AAGATTTACA ATATCAAAAG GACTGTCTGA AAATCCCAAC ACAACAATAC AATCTCACAG GCCGGGCACT TTGTCCTGTT GGGCGTATGA CACACAAAAC TCATTCGATC TCGCAGGGCA AAATGTCTGC AAAAGTTTTT GCAGTTCTCT TTCCAATGAA GTCGCAGGCA CTCCAACTAA AGCCTGTTTT ATAAAATAA
|
Protein sequence | MKKAFTLIEL LVVVLIIGIL AAIAVPQYNK AVLKSRATES MIIVNAIYGA LERYKLATGQ YPSTMSNFPS AAEINEYLDI EISLPKNTAI FYYPHSYFGI NYNTASVRFT ISKGLSENPN TTIQSHRPGT LSCWAYDTQN SFDLAGQNVC KSFCSSLSNE VAGTPTKACF IK
|
| |