Gene Emin_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0494 
Symbol 
ID6262694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp541419 
End bp542786 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content40% 
IMG OID642610964 
ProductMATE efflux family protein 
Protein accessionYP_001875387 
Protein GI187250905 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0475117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAACG CAAAAAAATC TAAATCTTTA ATAAAGGAAA TTTGGCTTGT AGCTTATCCT 
TTAATTATTA CAAACGCCTC TATAGTTACA ATGCAGTTTG TTGACAGGAT TTTTTTGTCC
CGCTATTCGC CGGACGCTTT GGCGGCCTGC GTACCCGGCG GATCTTTGGC TTTTACTTTT
GTAGCTTTGT TTATGGGTAT AGCCGCCTAT ACGGGCGTTT TTGTGGCGCA GTATGATGGG
CAGAAAAAAA GGGCCAATAT ATCCGTTTCT TTATGGCAGG GGATAATAAT ATCCTTATTT
TCAGGTATAA TTATAGCGTT GCTTACGCCC GTCGGTTTTT GGGTTATTGA CCTTTTTGAC
CATGCCCCCG AAGTTGTTGT TTTGGAAAAA CAATATTTCG GCATTCTTAA CCTTTTCGGC
GGGGTAATTA TTTTAACTAA CGCCCTTTCC GCTTTTTTTA TAGGCCGCGG CAAAACCACG
GTTCCGATGT CCGTTACAAT TATAGGTAAT ATAATAAACA TGTTTTTCGC CTACGCTATG
ATTTTTGGAC ATTTCGGTTT TCCCGAAATG GGGATAAAGG GCGCGGGGGT TGCTTATATC
ATTGGTAACG CGGGCATGGT TTTTTGCTAT ATATTATTTA TTTTTAACCA TAAAAATGAA
AGGAAATACA GGATTGCCAA ACTTGCCGGT TTTAATAAGC TGGCGTTTAT GCGTCTTGTA
AGGTACGGCG TGCCAAACGG CTTCGGCTTT TTTACGGATA TTCTTTCCTT TACCATATTT
ACTTTTTTTG TAGGCCATTT GGATATGTTT TCTTTAGCTG CGCATAATAT AGCTATAAGC
ATGCAAACAT TATCTTTTAT GCCGATACTT GGTTTGGGGC TTGGCGTTCA AATAGTTGTA
GGCCGATATA TGGGTATGAA AAAGCCCGAT AAAGTTGTGG AAGTTGTAAA AAACGCCTGC
AAAATGGGTT TGGCGTACGC GGGCACTTTA GCGGCTTTAT TTATACTTGT TCCTAATATT
TTTATAGGTT TGTTTTTACA GACAGGGGCC GAAGGTACGG CAGAGATAAC CAAATTAGCG
CTGCCTCTTA TAAAAATAGT TTCTTTTTTC GTATTTGCGG ACTGTATATA TTTAATTTTT
GGCGATACTT TGCGCGGCGC GGGTGATACA AAATTTCATA TGGTAGCTAT GCTTGCCAGC
GGCTGGCTTA TTTTGGTGCC AGGCACATAT ATTTTTGTTT ATATACTTAA AAAAGACGTT
TTGTTTATAT GGGGCTGGCT TACATTTTAC GCGGTAGTAA CAGCCGTTCT TATGACTGTA
AGATTCTTTA TGGGCAGATG GCGTACAATT GATATAACCG CCAAATAG
 
Protein sequence
MGNAKKSKSL IKEIWLVAYP LIITNASIVT MQFVDRIFLS RYSPDALAAC VPGGSLAFTF 
VALFMGIAAY TGVFVAQYDG QKKRANISVS LWQGIIISLF SGIIIALLTP VGFWVIDLFD
HAPEVVVLEK QYFGILNLFG GVIILTNALS AFFIGRGKTT VPMSVTIIGN IINMFFAYAM
IFGHFGFPEM GIKGAGVAYI IGNAGMVFCY ILFIFNHKNE RKYRIAKLAG FNKLAFMRLV
RYGVPNGFGF FTDILSFTIF TFFVGHLDMF SLAAHNIAIS MQTLSFMPIL GLGLGVQIVV
GRYMGMKKPD KVVEVVKNAC KMGLAYAGTL AALFILVPNI FIGLFLQTGA EGTAEITKLA
LPLIKIVSFF VFADCIYLIF GDTLRGAGDT KFHMVAMLAS GWLILVPGTY IFVYILKKDV
LFIWGWLTFY AVVTAVLMTV RFFMGRWRTI DITAK