Gene Emin_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0475 
Symbol 
ID6262681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp507276 
End bp507791 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID642610946 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875369 
Protein GI187250887 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG GATTTACACT AATAGAGCTT TTAGTGGTAG TTCTGATTAT AGGCATTTTA 
GCCGCTATAG CGTTGCCCCA ATATAATACG GCTGTTGAAA AAGCCCGTTA TACGCAGCTT
TTTACGCTTT GCAAGGCTAT AGCTGATTCA GCCGAAAGAT ATTATCTTTC AGAAAGTGTT
TATCCGCCGA CATGGGGTGA TTTGGATATA GATATCCCGG GCGACTGGAC TGTTGACTTA
AGCAACCCCC ACCACGCTAC CAGCCCCAAA TATGATATTG ATTTATATGA TTCCTCCTCA
AAAAACATCA TAGGTTATAT AAATAGAAAC GCTGATAGGA AAATAGCTTA TGTAGTATGG
CTTAACAAAT CAACCACACG CCCAGGCAAC CGCGAATGCT GGGCTGATCC TTCAAGCTCA
AGACACCAAA ACATATGCAA ATCCCTGGGC GGAGTTCAAA CCGGCACAAC CGGCAGCCCC
ACATTTCCGA GTTGGATAAG ATACGACTTA AACTAG
 
Protein sequence
MKQGFTLIEL LVVVLIIGIL AAIALPQYNT AVEKARYTQL FTLCKAIADS AERYYLSESV 
YPPTWGDLDI DIPGDWTVDL SNPHHATSPK YDIDLYDSSS KNIIGYINRN ADRKIAYVVW
LNKSTTRPGN RECWADPSSS RHQNICKSLG GVQTGTTGSP TFPSWIRYDL N