Gene Emin_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0449 
Symbol 
ID6262464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp482156 
End bp482659 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID642610919 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875343 
Protein GI187250861 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000146857 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000000193676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTTACGCT TATTGAACTT TTGGTAGTTG TTTTAATTAT AGGTATATTA 
GCGGCGATAG CATTGCCCCA GTATAACCTG GCGGTTGAAA AGTCCCGCGC GGCGGAAGCC
TTTACCGTTT TAAAATCGCT TTCCCAAGCG GCTGAAATTT ACAGGCTTGA AACAGGCTCT
TACCCTACTG TTAATGATTG GGACAATTTA TCCGTTGATA TGCCTGCCGG CAACAGAGTG
CACTATACTT CCATCGGAGG GGACGCCTGG GTAGTGTCAA GCGGCAAATG GCGCTATTAC
TTGGGTTATG GTAACGGAAT TTGGGCCAAC AGGGGTGCTT CAGGCAGCGC GTATAATATA
CAATACAGAT TTTCGGATAA CAGATATTAT TGCCAGGCCT ATTTAGGCAA ATCAGAGGTC
TATAGAAAAG TTTGCCTAAA TCTTTGCGCG GGCAATGCCT TTACGGCTAA AAGCGATAGG
GAAGAATGTC TTATTAAAAA CTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYNL AVEKSRAAEA FTVLKSLSQA AEIYRLETGS 
YPTVNDWDNL SVDMPAGNRV HYTSIGGDAW VVSSGKWRYY LGYGNGIWAN RGASGSAYNI
QYRFSDNRYY CQAYLGKSEV YRKVCLNLCA GNAFTAKSDR EECLIKN