Gene Emin_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0345 
Symbol 
ID6264037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp371980 
End bp372450 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content40% 
IMG OID642610811 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875241 
Protein GI187250759 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000996245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTTACTTT AATTGAACTG TTGGTCGTTG TGCTTATTAT AGGAATACTG 
GCGGCTATAG CTTTGCCGCA ATATAACAAA GCTGTGGAAA AATCCCGCGC GGCTGAAGCT
TTTACCATAT TAAAAGCGAT ACATTTGGCC AATGAAAGAT TCTTTTTACA AACAGGGGTA
TATAACGCTA CTTTTAACGA CCTTGATATT GAAATTCCCG GCGCGGACGC TTTCTACCAA
GTAGACAGAA AAGAAACAAA AACCTTTTCT TACGCATTAA GAAATGACCT TTCATGGGTT
GTTGCAAGCC GTGTTCCGGT AGCTACAAGA TACGCTATAG TTTTTGTGCA CGGTACGGGT
GAACGCCGCT GCGTAATTTA TGATACAAAG TATGCTGAAG TTTGCAAATC CTTAGGAGTT
GATACCAGTA AAACGTGTTC TTTTGCGAAC GGATGCTTTG TTTTGCAGTA A
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYNK AVEKSRAAEA FTILKAIHLA NERFFLQTGV 
YNATFNDLDI EIPGADAFYQ VDRKETKTFS YALRNDLSWV VASRVPVATR YAIVFVHGTG
ERRCVIYDTK YAEVCKSLGV DTSKTCSFAN GCFVLQ