Gene Emin_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0340 
Symbol 
ID6263474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp365375 
End bp365872 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content39% 
IMG OID642610806 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875236 
Protein GI187250754 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTTACATT AATTGAACTT TTGGTAGTTG TTTTAATTAT AGGAATACTT 
GCCGCCATAG CATTGCCCCA ATATAATAAA ACAGTTGAAA GAAGCAGAAT AACCGAAGCG
CTTATTCTTT CAAGAGCAGC TCTAAACTCC CAACAAATAT ATAAATTACA AACAGGTGAT
TACGCTTTAA GCTGGGACGA GCTGGATATT ACCGTTCCAG CAACGCAGTT TAAACTGGCT
GAGGAATATC ACGGAGCTGG GCATTACGCC ATAATGAAAT ATTATGATGT ATTCTTAGAT
AAAAATAAAT CGTGGGTAGC ATCCGTAAGA AGACACCCCA ACTGGGGGCG TACACCTTTA
ATAGCCCTTA GTTTAGAAGA CCCCACTAAA CAATATTGCT GTTTTTATCC CACCGGCGGG
GAAGATGTTT GTAAAACAGT GGCAGACTCT TCCAAAACAA CGACTTTATG GGGAAGAAAC
TGTTACCAAA TAAAATAG
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYNK TVERSRITEA LILSRAALNS QQIYKLQTGD 
YALSWDELDI TVPATQFKLA EEYHGAGHYA IMKYYDVFLD KNKSWVASVR RHPNWGRTPL
IALSLEDPTK QYCCFYPTGG EDVCKTVADS SKTTTLWGRN CYQIK