Gene Emin_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0331 
Symbol 
ID6263553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp353210 
End bp353728 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content38% 
IMG OID642610796 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875227 
Protein GI187250745 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GTTTTACGTT AATTGAACTT TTAGTTGTTG TTTTAATAAT AGGTATTTTA 
GCGGCTATAG CTTTACCGCA GTATAATAAA GCGGTGGCCC GCAGCCGTTC GGCCGAGATG
CTTCTTGCCT TAAAAGCAAT TAACACCGCA CAAAAAGCGC ATGTGCTGGC AACAGGCTCT
TTCGCTAAAG ATTATGGCGA GCTTTCCATA GAATTCCCGG GCTGTAATTA TCAAACTGTT
TCCGGGACAA TATCTATAAA TTATTTAAAG TGTAATAAGT TCACGTCTGT AATTGAAACC
ACAGGCAGAG CAATTTTTAT AGGTCCTTAT AATGGAAGTA ATATGAGTTT ATCTCTAAAC
GAAAGAAGCA CATATATTTT ATATACTCCG CTTGCTACGG ATGAGGTTAT TTGCAGAGAC
GGCAATATTT TACCCGTAAA ACCATCTTGT AAAGATATCG GTTTTACAAA AGCGTATACG
GGGAACTCAT GTTTTTGGGG TTCTTGCTAT ACCCAGTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYNK AVARSRSAEM LLALKAINTA QKAHVLATGS 
FAKDYGELSI EFPGCNYQTV SGTISINYLK CNKFTSVIET TGRAIFIGPY NGSNMSLSLN
ERSTYILYTP LATDEVICRD GNILPVKPSC KDIGFTKAYT GNSCFWGSCY TQ