Gene Emin_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0313 
Symbol 
ID6263681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp334391 
End bp336127 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content43% 
IMG OID642610778 
ProductDNA primase 
Protein accessionYP_001875210 
Protein GI187250728 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000166585 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGACA AAATAATAGA AGAAATAAGG GACAGAGTTG ACATTGTTGA ACTGGTAAGA 
GAATATGTGC CCTCTCTTAA AAGAGCGGGT AAAACATATA AAGGCTGCTG CCCTTTTCAT
AATGAGAAAA CCCCTTCTTT TACGGTAAGC CAGGACAGGG GGCTTTTCTA TTGTTTCGGT
TGTCAGACCG GGGGCGACGT TTTTGCGTTT TTGATGAAGA CAGAAAACCT GTCTTTTTCT
GAAGCGGCAA AAAAATTAGC CGAACGCGCC GGACTTGAAT GGAAAAAAGA GGAAGTATTG
ACCCAGGAGG AAAAAAACCG TCTGGAGGCA AGGAAATTAT TAGATTTCGC CAAAGTTTTT
TACAATAAAA CATTGTTAAG CTCCCAAGGT AATGAAGCCA GGGGCTATTT GAAAAAAAGA
AGTTTAACCA AAGAAACGGT TGAAAAATTT GAAATAGGTT TTACCCCCCA GGGGGTTGAC
GCGCTTAGTA AAGCGGCATT GGCAAACGGC TATAATGCTA ACTTACTGCG TTCCGCGGGG
CTTGCCGCCC AGGGGCAGTA TGGGGTTAGG GATTATTTCA GGTCAAGAAT AATGTTTCCC
ATTATCAACC ACCGGGGTGA AACTGTTGGC TTCGGCGGGC GTATATTCGG CGAAGGGGAA
CCTAAATATT TAAATTCGCC CGAAACAATT TTATTTTCCA AAAGCAGGGT TTTATACGGG
CTTAATTTTG CCGGGCCTGA AATACGTAAG GCAAATTACA GCATTTTGCT TGAAGGATAT
ATGGATGTAA TAGGCGTTAT GCAAAGCGGC ATTGGCAACT GCGTGGCCCC TTTGGGCACA
AGTTTTAATG AAGAGCACGC CAAGCTTTTA AAAAGATACA GTGAAAACGC CGTAATTTTA
TTTGACCCCG ACGCCGCGGG CATAAAAGCC AGTTTAAGAA CGGCATTAAT TTTAATACAG
CAGGGTTTAT TTGTTAAAGT AGCCACTTTG GGCGAAGAAG GCCTTGACCC GGACGAGTTT
ATTAACAAGT ACGGAAAGGA AAAATTTGAA AATATTTTAG CGGACGCGGT TGACATTATT
GATTTTCAGG CTGATGTGCT TATTAAACAG CACGGCGGCA ATTTAACGCC GCAAAACAAA
ACGCAGATAG CCGCGCAGCT TATGGAAATA GTTTCCGTAC AGCCGGACCC TATAGTAAAA
AGCGAGTGGA TTAAAATTGT TTCCGAAAAA TTAAGCGTGG AGGAACACCT TTTAACGCCT
AAAAAAACGG CTGTTAACAC AAGAAGAAAC ACCCCGCCCG CGCCGCAGGT TAAAAAAACA
AATATTCCCG TAGAGGAAGA AGATTTGGTC GCTTGGCTTT TAAAAAGCCC GGCGCATATA
ACGCAAGCCC AAGAGCTTGA CGAAAGTAAG TTTACAAGCC GCGCTTGTTA TGAGATTATC
AGTACTATGG ACGAAATATT AAAACAAACC CCATCTACTG AGAACATAGC TCCGATGCTG
ATAAAAAAAT TACCACAGCA CGAAAACTTT ATACTCAAAA TAAGCATGGC CGCGACGCCG
AAGGACTTTA ACCCGGCCCG CGATATAAGA GACTGCGCAG CTAAGATTGA AAGAAACTAC
CTTTCAAAAA AATTAGCGGC GTTAAAAGCA GAAATAAAAA AAATGGGAGT CGGCAGCGTG
CCTGAGGCGT TACTCAGAGC GCAGAACGAA CTTCAAAAAC AAATTAAAAA TAGTTAG
 
Protein sequence
MSDKIIEEIR DRVDIVELVR EYVPSLKRAG KTYKGCCPFH NEKTPSFTVS QDRGLFYCFG 
CQTGGDVFAF LMKTENLSFS EAAKKLAERA GLEWKKEEVL TQEEKNRLEA RKLLDFAKVF
YNKTLLSSQG NEARGYLKKR SLTKETVEKF EIGFTPQGVD ALSKAALANG YNANLLRSAG
LAAQGQYGVR DYFRSRIMFP IINHRGETVG FGGRIFGEGE PKYLNSPETI LFSKSRVLYG
LNFAGPEIRK ANYSILLEGY MDVIGVMQSG IGNCVAPLGT SFNEEHAKLL KRYSENAVIL
FDPDAAGIKA SLRTALILIQ QGLFVKVATL GEEGLDPDEF INKYGKEKFE NILADAVDII
DFQADVLIKQ HGGNLTPQNK TQIAAQLMEI VSVQPDPIVK SEWIKIVSEK LSVEEHLLTP
KKTAVNTRRN TPPAPQVKKT NIPVEEEDLV AWLLKSPAHI TQAQELDESK FTSRACYEII
STMDEILKQT PSTENIAPML IKKLPQHENF ILKISMAATP KDFNPARDIR DCAAKIERNY
LSKKLAALKA EIKKMGVGSV PEALLRAQNE LQKQIKNS