| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0312 |
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| Symbol | |
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| ID | 6263690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Elusimicrobium minutum Pei191 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010644 |
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| Strand | - |
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| Start bp | 332638 |
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| End bp | 334353 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642610777 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001875209 |
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| Protein GI | 187250727 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.593238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00000519497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAAACG TTGCAAATAA AGCTTTTAAA GATTTAGTTG AAGTTGGTAA AGAAAACGGT
TTTCTTACCT TGGACGAAAT TAACCGTTCG CTTACATCTT CCTCAATGAG CGCGGAAGAT
ATTGACGGTT TAATGGGCAC ATTGGAAGAT TTGGGCATAC AGGTAGTTGA CCGTAAAAAA
TATAAATCCG TAGCCATGGC GGAAAAAGAA GCCTATACCG AAGAGTTTAT GGCTAACCCC
GATATTTCTA ACTCTATCCG CATGTACTTG TCTGAAATGG GCAAAGTGCC GCTGCTTTCC
AGAGACGAGG AAATAACCTT GGCCCGTAAC GTCAGGGAAA GAGAAAAAGA ATTGCGCAAA
CTTGTGTTGG AATCCCCCAT CACAATGCGC GAAATTTGCA ACTGGGAAGA ACTTGTAGAC
CAAGAAGAAA TGACTACAAA AGAATTGATG CCCAGAGGCA AAAGAACAAC GCGCGAACTT
AACAACATGC GTAAAAAACT TAAAGAGGCC GCCAAGTTTA TCGGTAAACG GGAAGGTGAA
ATTACCGAAT TAATGAAAAA ATTGCGCGAG CCCAGCATTT CAGACAAAAT GCTTAACAAA
TATACCGAAG CTCTTGAGAA AAAGCAAAAG GAAGTTGTTG ACAGCATTAT AAAACTTAAT
TTAAACCAAA ATAAAATTAA GCGTTTAACA AACAGAATCA AAAGTTTGGC GCAGAGAATA
GCCGAGTCAA GAAACGACCT TAACAGGTTT GACGAATATT TTGGCCAGTA CGCCGAAGTA
AAAAAACTTT TTACCCAGGC TTCCAAAGGA AAAATTTCTA AAGCCGAACT TAAAAAGAAA
ACCCGCTTTA CTTATGAAGA ACTTGAAACC GCCATCAACA ATATCGATAT GATACGTTCA
AGACATGAGA AGCTTATAAA CACTCTTCCC ATGAGCGAAA AAGAGTTTTT GGCTTTTAAC
GACCGCATTG TGTTTTTTGA AGACATGATT TTGCAAGACA AACTTAAACT TATTAAAGCG
AACTTAAGGC TGGTTGTGTC TATCGCCAAA AAGCACGTAA ACTCAAATTT AGAACTTTCC
GACTTAATCC AGGAAGGCGG TTTGGGCCTT ATGAAAGCCG TGGAAAAGTT TGAATATAAA
AGAGGTTTTA AATTCTCAAC CTACGCAACA TGGTGGATAA GGCAGTCCAT TAACCGCGCC
ATCGCGGACC AGGCCAACAC CATACGCATA CCAGTGCATA TGAAGGAGCT TGTTTCCAAA
CTTACAAAAG TTACAAATAA GTTCAGACAG GAACACGGCA GGGAACCCAG CTTGGAAGAT
TATTCAAAAT CACTGCGCCT TTCTATGGAA AAAGTTAAAG GCGTGCTTAA AATAATGCAA
GACCCTATAT CTTTATCAAC ACCCGTAGGC GAGGATGAAG ATTCCAACCT GGAAGACTTT
ATTGAGGATA AAGCGGGCGC TAACCCCACG GTAACCGCGT CTGACTTTTT AAGAAAGCAA
GAAGTATCCG AAGTGCTTAA CACACTTTCA GAACGTGAGG CAAAAATTAT AAGGCTGCGC
TTTGGCATTG ACTCGGGCTA TCCCAGAACA TTAGAAGAAG TGGGTAAAAT GTTTAACGTA
ACACGTGAGC GCGTAAGACA AATTGAGGCA AAAGCCATAC GAAAACTGCG CCACCCGAGC
AGAACCAAAA TGCTTAAAGA TTATTCCGAC GAATAG
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| Protein sequence | MVNVANKAFK DLVEVGKENG FLTLDEINRS LTSSSMSAED IDGLMGTLED LGIQVVDRKK
YKSVAMAEKE AYTEEFMANP DISNSIRMYL SEMGKVPLLS RDEEITLARN VREREKELRK
LVLESPITMR EICNWEELVD QEEMTTKELM PRGKRTTREL NNMRKKLKEA AKFIGKREGE
ITELMKKLRE PSISDKMLNK YTEALEKKQK EVVDSIIKLN LNQNKIKRLT NRIKSLAQRI
AESRNDLNRF DEYFGQYAEV KKLFTQASKG KISKAELKKK TRFTYEELET AINNIDMIRS
RHEKLINTLP MSEKEFLAFN DRIVFFEDMI LQDKLKLIKA NLRLVVSIAK KHVNSNLELS
DLIQEGGLGL MKAVEKFEYK RGFKFSTYAT WWIRQSINRA IADQANTIRI PVHMKELVSK
LTKVTNKFRQ EHGREPSLED YSKSLRLSME KVKGVLKIMQ DPISLSTPVG EDEDSNLEDF
IEDKAGANPT VTASDFLRKQ EVSEVLNTLS EREAKIIRLR FGIDSGYPRT LEEVGKMFNV
TRERVRQIEA KAIRKLRHPS RTKMLKDYSD E
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